Simulator comparisons: BioModels release 9

Summary

TestBioUMLByoDyncopasiCVODEedu.kgi.roadRunnerJarnacjsimOscill8 CoreSBWOdeSolverMathSBMLSBToolbox2VCell
passed:1501491339137728810614313410662
no difference:12912910671076573571261045052
small difference:8710291041316362
significant difference:13131702161545414208

Legend:
passed   -  total number of results;
no difference   -  Abs( (x-median)/median ) < 0.01 or x < ZERO and median < ZERO;
small difference   -  Abs( (x- median)/median ) < 0.5;
significant difference   -  otherwise;

Details

Legend:

Text color indicates difference between values:
  -  no significant difference ( < 0.1%)
  -  small relative error ( > 0.1% and <50%)
  -  simulation results significantly differ ( >50%)

TestBioUMLByoDyncopasiCVODEedu.kgi.roadRunnerJarnacjsimOscill8 CoreSBWOdeSolverMathSBMLSBToolbox2VCell
BIOMD0000000001.xml0,000,000,00-100--1000,00100--
BIOMD0000000002.xml0,000,000,00-0,000,001001000,001001000,00
BIOMD0000000003.xml0,000,000,00-0,00-0,00-0,000,000,000,00
BIOMD0000000004.xml0,000,000,00-0,00-0,00-0,000,000,000,00
BIOMD0000000005.xml0,000,000,00-0,000,00-0,00-0,007,5-
BIOMD0000000006.xml0,000,000,000,000,000,000,000,000,000,001,0-
BIOMD0000000007.xml0,001000,00-0,00---0,000,00--
BIOMD0000000008.xml0,000,000,00-0,00-0,00-0,000,000,000,00
BIOMD0000000009.xml0,000,000,00-0,000,00100-0,006,383,00,00
BIOMD0000000010.xml0,000,000,00-0,000,000,000,000,000,000,000,00
BIOMD0000000011.xml0,000,000,000,000,000,000,000,000,003,618,3-
BIOMD0000000012.xml0,000,000,00-0,000,000,000,000,000,000,00-
BIOMD0000000013.xml0,000,000,000,000,000,000,000,00-0,000,00-
BIOMD0000000014.xml0,000,000,000,000,000,000,00-0,000,008,2-
BIOMD0000000015.xml0,000,000,00-0,000,000,004,72E34,72E30,000,00-
BIOMD0000000016.xml0,000,000,00-0,000,00100,01710,000,000,00-
BIOMD0000000017.xml0,000,000,000,000,00-0,002,95E40,000,000,00-
BIOMD0000000018.xml0,000,000,00-0,00-1,03E65,01E30,000,000,00-
BIOMD0000000020.xml6,26,2--------5,9-
BIOMD0000000021.xml0,000,000,00-0,000,000,000,000,000,003,80,00
BIOMD0000000022.xml0,000,000,00-0,000,000,000,000,000,001,3-
BIOMD0000000023.xml0,000,000,00-0,000,000,000,000,000,002,0-
BIOMD0000000024.xml1,00E176,06E3--3,10E17-100,0100,0----
BIOMD0000000025.xml1,03E17---100,0-------
BIOMD0000000026.xml0,000,000,00-0,000,000,00-0,000,000,000,00
BIOMD0000000027.xml0,000,000,00-0,000,000,000,000,000,000,000,00
BIOMD0000000028.xml0,000,000,00-0,000,000,000,000,000,000,000,00
BIOMD0000000029.xml0,000,000,00-0,000,000,000,000,000,000,000,00
BIOMD0000000030.xml0,000,000,00-0,000,000,000,000,000,000,000,00
BIOMD0000000031.xml0,000,000,00-0,000,000,000,000,000,000,000,00
BIOMD0000000032.xml0,000,000,00-0,00-0,000,000,000,000,000,00
BIOMD0000000033.xml0,000,0013,3-0,000,000,000,000,004,794,91,25E5
BIOMD0000000034.xml2,16E136,26E14--7,48E5-4,26E7-----
BIOMD0000000035.xml0,000,000,00-0,000,000,000,000,000,000,00-
BIOMD0000000036.xml0,000,000,00-0,000,000,00-0,000,002,0-
BIOMD0000000037.xml0,000,000,00-0,000,000,000,000,000,002,00,00
BIOMD0000000038.xml0,000,000,00-0,000,000,000,000,000,000,000,00
BIOMD0000000039.xml0,000,000,00-0,000,000,000,000,000,006,1-
BIOMD0000000040.xml0,000,00--0,000,000,001000,00100100-
BIOMD0000000041.xml0,000,000,00-0,000,0093,895,61010,000,00-
BIOMD0000000042.xml0,000,000,00-1,16E39980,000,000,000,000,000,00
BIOMD0000000043.xml0,000,001,4-0,000,000,0036,536,80,00572-
BIOMD0000000044.xml0,000,001,5-0,000,000,000,005,10,0036,21,56E3
BIOMD0000000045.xml0,000,000,00-0,000,000,000,000,000,000,00-
BIOMD0000000046.xml0,000,0018,6-1001,50,000,000,004,83E32,23E40,00
BIOMD0000000047.xml0,000,000,00-0,00-0,0095,30,000,000,00-
BIOMD0000000048.xml0,000,00100-0,000,001002,91E40,000,002,70,00
BIOMD0000000049.xml0,000,002,0-1,90,000,005,37E100,0056,11000,00
BIOMD0000000050.xml0,000,000,00-0,000,00-0,000,000,00-0,00
BIOMD0000000051.xml0,000,000,00-0,000,00-88,70,000,000,000,00
BIOMD0000000052.xml0,000,000,00-0,000,000,000,000,000,00-0,00
BIOMD0000000053.xml0,000,000,00-0,000,000,000,000,001,950,50,00
BIOMD0000000054.xml0,000,000,00-0,000,000,007700,000,000,00-
BIOMD0000000055.xml0,000,000,00-0,00---0,000,0025,15,30E9
BIOMD0000000056.xml6781,48E33,20E3-3,20E3----1,48E3--
BIOMD0000000057.xml0,000,000,00-0,00-0,001,10E60,000,001,50,00
BIOMD0000000058.xml0,000,000,00-0,00-0,001000,000,001,30,00
BIOMD0000000059.xml0,000,000,00-0,00-0,00-0,000,000,00-
BIOMD0000000060.xml0,000,000,000,000,000,000,000,000,000,000,000,00
BIOMD0000000061.xml0,000,000,00-0,000,000,000,000,000,0014,10,00
BIOMD0000000062.xml0,000,000,00-0,00-0,002,03E50,000,000,00-
BIOMD0000000063.xml0,000,000,00-0,000,000,00-0,000,000,00-
BIOMD0000000064.xml0,000,000,00-0,00-0,00-0,000,000,000,00
BIOMD0000000065.xml0,000,000,00-0,000,000,00-0,000,000,000,00
BIOMD0000000066.xml0,000,000,00-0,000,000,000,000,000,001,1100
BIOMD0000000067.xml0,000,000,00-0,000,000,000,000,000,000,000,00
BIOMD0000000068.xml0,000,000,00-0,000,00-0,000,000,000,000,00
BIOMD0000000069.xml0,000,000,00-0,00-0,001230,000,007,764,5
BIOMD0000000070.xml7,80,000,00-0,000,000,000,000,000,000,00-
BIOMD0000000071.xml0,000,00149-0,000,00--0,000,000,00-
BIOMD0000000072.xml0,000,000,00-0,000,002,73E60,000,000,000,00-
BIOMD0000000073.xml0,000,000,00-0,00---0,000,000,000,00
BIOMD0000000074.xml0,000,000,00-0,00---0,000,0046,30,00
BIOMD0000000075.xml100100100-7,6---7,17,6--
BIOMD0000000076.xml0,000,000,00-0,000,000,000,000,000,000,000,00
BIOMD0000000077.xml9,09E40,009,09E4-2,0--2,95E450,00,0050,0-
BIOMD0000000078.xml5,22E111240,00-0,00---0,000,00-70,3
BIOMD0000000079.xml0,000,000,00-0,00---0,000,006,50,00
BIOMD0000000080.xml0,000,000,00-0,000,000,000,000,003,31000,00
BIOMD0000000081.xml0,000,001,45E3-0,00---5,80,002,33E3-
BIOMD0000000082.xml0,000,000,00-0,000,000,002,00,002,18E56,20,00
BIOMD0000000083.xml5,22E111000,00-0,00---0,000,00-32,4
BIOMD0000000084.xml0,000,000,000,000,000,000,000,000,000,001,3-
BIOMD0000000085.xml0,000,001,4-0,000,00-1750,001002450,00
BIOMD0000000086.xml2,22,2100-1000,00-5,30E40,0087,11,60E30,00
BIOMD0000000087.xml0,0010010,2-75,8--0,000,001,84E4--
BIOMD0000000088.xml0,000,000,00-90,0---0,000,00--
BIOMD0000000089.xml0,000,000,00-0,00---0,000,0016,90,00
BIOMD0000000090.xml0,007910,00-1,12E4-0,005,02E30,000,000,00-
BIOMD0000000091.xml0,000,001,31,21,3100-1,15E80,000,001,2-
BIOMD0000000092.xml0,000,000,00-0,000,000,000,000,001,50,00-
BIOMD0000000093.xml0,000,002,0-1,5-2,60E87970,000,001000,00
BIOMD0000000094.xml0,000,00100-12,2-7,90E82,19E40,000,001000,00
BIOMD0000000095.xml0,000,000,00-0,00--0,000,000,00--
BIOMD0000000096.xml0,000,000,00-0,00--0,000,000,00--
BIOMD0000000097.xml0,000,00100-0,00--1000,000,00--
BIOMD0000000098.xml0,000,000,00-0,000,000,000,000,000,0038,8-
BIOMD0000000099.xml0,000,000,00-0,000,000,000,000,000,000,000,00
BIOMD0000000100.xml0,000,000,00-0,000,000,000,000,000,009,1402
BIOMD0000000101.xml0,000,000,00-0,00--0,000,000,00--
BIOMD0000000102.xml0,000,000,00-0,000,000,000,000,000,009,60,00
BIOMD0000000103.xml0,000,000,00-99,71,07E40,000,000,000,009,60,00
BIOMD0000000104.xml150100150-100--99,53,32E31,054,0-
BIOMD0000000105.xml0,000,000,001,5100-0,000,000,000,00100-
BIOMD0000000106.xml0,000,00100-1,00E139,65E120,001,81,55,69E677,5100
BIOMD0000000107.xml0,000,000,00-0,00-0,009800,000,000,00-
BIOMD0000000108.xml0,000,000,00-0,000,000,00-0,0062,41,64,7
BIOMD0000000109.xml0,000,000,00-0,00--1000,000,00--
BIOMD0000000110.xml0,000,000,00-0,008360,008360,000,000,00-
BIOMD0000000111.xml4,72E334545,6-4,60E8--40545,645,6--
BIOMD0000000112.xml0,000,000,00-0,000,00--0,000,000,00-
BIOMD0000000113.xml0,000,002,80E3-0,00--1003,30,00-0,00
BIOMD0000000114.xml0,000,000,00-0,00-0,000,000,000,000,00-
BIOMD0000000115.xml0,000,000,00-0,00-0,003140,000,0013,4-
BIOMD0000000116.xml0,000,000,00-0,000,000,000,000,000,000,000,00
BIOMD0000000117.xml0,000,0090,2-0,00--90,219,10,00--
BIOMD0000000118.xml0,000,00------0,00-0,00-
BIOMD0000000119.xml0,000,000,00-0,00--16,30,000,000,00-
BIOMD0000000120.xml0,000,000,00-0,00--0,000,000,00--
BIOMD0000000121.xml0,000,000,00-0,00---0,000,00--
BIOMD0000000122.xml0,000,000,00-100,0--2790,000,00--
BIOMD0000000123.xml0,000,000,00-0,000,00100,099,80,000,000,000,00
BIOMD0000000124.xml0,000,000,00-0,00--0,000,000,00--
BIOMD0000000125.xml1,05E61,41,05E6-1,4--1,05E61,41,490,0-
BIOMD0000000126.xml1,91,98,94E4-1,9--9,84E48,41,9--
BIOMD0000000127.xml0,000,00------0,00---
BIOMD0000000128.xml1,81,80,00-0,00--0,000,000,00--
BIOMD0000000129.xml0,000,00------0,00---
BIOMD0000000130.xml0,000,00------0,00---
BIOMD0000000131.xml0,000,00------0,00---
BIOMD0000000132.xml0,000,00------0,00---
BIOMD0000000133.xml0,000,00------0,00---
BIOMD0000000134.xml0,000,00------0,00---
BIOMD0000000135.xml0,000,00------0,00---
BIOMD0000000136.xml0,000,00------0,00---
BIOMD0000000137.xml5001000,00-0,00--100,00,000,00--
BIOMD0000000138.xml0,000,000,00-0,00-0,000,000,000,000,00-
BIOMD0000000139.xml0,000,000,00-0,00--1000,000,00--
BIOMD0000000140.xml0,000,000,00-100--1000,000,00--
BIOMD0000000141.xml0,000,00------0,00---
BIOMD0000000142.xml0,000,00------0,00---
BIOMD0000000143.xml0,000,000,00-0,000,001,13E121,67E110,0026,86,00,00
BIOMD0000000144.xml3,23,22,14E3-3,2--2,15E33,33,2--
BIOMD0000000145.xml0,000,000,00-0,00-0,002,48E170,000,001,6-
BIOMD0000000146.xml0,000,000,00-1,92E96,40E6440-0,000,001,10,00
BIOMD0000000147.xml0,000,000,00-1000,000,000,000,007,557,1-
BIOMD0000000148.xml1001000,00-0,00--0,001,99,9--
BIOMD0000000149.xml0,000,000,00-0,00--0,000,00100--
BIOMD0000000150.xml31,50,000,00-0,00--100,00,004,33,90,00
BIOMD0000000151.xml6,25,8243-3,14E4-1,03E7-5,87,68E4100-