Test BIOMD0000000037.xml details

Test: BIOMD0000000037.xml - Ok

test	: BIOMD0000000037.xml
model	: xml, reaction graph
simulator engine	: DormandPrince
generated code	: BIOMD0000000037.java
results	: CSV file
plots	: plot
comparison	: comparison with other simulators
status	: Ok
simulation time	: 0 s.

Parameters:
ZERO 1.0E-100
ATOL 1.0E-15
RTOL 1.0E-12
STEP 0.01

Text color indicates difference between values:
- no significant difference ( < 0.1%)
- small relative error ( > 0.1% and <50%)
- simulation results significantly differ ( >50%)

Variables: V prepreS Pr Yi S Xi Pi Ya Pfr preS Xa
Simulators: ByoDyn copasi edu.kgi.roadRunner Jarnac SBToolbox2 VCell Oscill8 Core SBWOdeSolver MathSBML jsim BioUML

time

result

prepreS

Pfr

preS

0.0

BioUML

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

ByoDyn

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

Jarnac

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

MathSBML

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

Oscill8 Core

3,00000E1

2,00000E2

0,00000E0

6,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

SBToolbox2

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

SBWOdeSolver

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

VCell

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

copasi

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

edu.kgi.roadRunner

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

jsim

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

min

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

max

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

mean

3,00000E1

2,00000E2

0,00000E0

6,00000E0

0,00000E0

9,00000E-1

1,00000E1

0,00000E0

0.0

relative error(%)

0,00

0.2

BioUML

3,36254E1

1,99970E2

1,96040E-1

0,00000E0

1,45047E-3

5,98878E0

1,97353E-3

9,00000E-1

9,80199E0

2,90971E-2

1,12213E-2

0.2

ByoDyn

3,36254E1

1,99970E2

1,96040E-1

0,00000E0

1,45047E-3

5,98878E0

1,97353E-3

9,00000E-1

9,80199E0

2,90971E-2

1,12213E-2

0.2

Jarnac

3,36254E1

1,99970E2

1,96040E-1

0,00000E0

1,45053E-3

5,98878E0

1,97354E-3

9,00000E-1

9,80199E0

2,90976E-2

1,12214E-2

0.2

MathSBML

3,36254E1

1,99970E2

1,96040E-1

0,00000E0

1,45047E-3

5,98878E0

1,97353E-3

9,00000E-1

9,80199E0

2,90972E-2

1,12213E-2

0.2

Oscill8 Core

3,36254E1

1,99970E2

1,96040E-1

1,45083E-3

5,98878E0

9,00000E-1

9,80199E0

2,91010E-2

0.2

SBToolbox2

3,36257E1

1,99970E2

1,96038E-1

0,00000E0

1,45531E-3

5,98882E0

1,97357E-3

9,00000E-1

9,80200E0

2,91232E-2

1,12208E-2

0.2

SBWOdeSolver

3,36254E1

1,99970E2

1,96040E-1

0,00000E0

1,45083E-3

5,98878E0

1,97363E-3

9,00000E-1

9,80199E0

2,91010E-2

1,12218E-2

0.2

VCell

3,36254E1

1,99970E2

1,96040E-1

0,00000E0

1,45047E-3

5,98878E0

1,97353E-3

9,00000E-1

9,80199E0

2,90971E-2

1,12213E-2

0.2

copasi

3,36254E1

1,99970E2

1,96040E-1

0,00000E0

1,45047E-3

5,98878E0

1,97353E-3

9,00000E-1

9,80199E0

2,90971E-2

1,12213E-2

0.2

edu.kgi.roadRunner

3,36254E1

1,99970E2

1,96040E-1

0,00000E0

1,45047E-3

5,98878E0

1,97353E-3

9,00000E-1

9,80199E0

2,90971E-2

1,12213E-2

0.2

jsim

3,36254E1

1,99970E2

1,96040E-1

0,00000E0

1,45047E-3

5,98878E0

1,97353E-3

9,00000E-1

9,80199E0

2,90971E-2

1,12213E-2

0.2

min

3,36254E1

1,99970E2

1,96038E-1

0,00000E0

1,45047E-3

5,98878E0

1,97353E-3

9,00000E-1

9,80199E0

2,90971E-2

1,12208E-2

0.2

max

3,36257E1

1,99970E2

1,96040E-1

0,00000E0

1,45531E-3

5,98882E0

1,97363E-3

9,00000E-1

9,80200E0

2,91232E-2

1,12218E-2

0.2

mean

3,36254E1

1,99970E2

1,96040E-1

0,00000E0

1,45047E-3

5,98878E0

1,97353E-3

9,00000E-1

9,80199E0

2,90972E-2

1,12213E-2

0.2

relative error(%)

0,00

0.4

BioUML

3,65936E1

1,99769E2

3,84316E-1

0,00000E0

1,85357E-2

5,95806E0

7,78983E-3

9,00000E-1

9,60789E0

2,11567E-1

4,19421E-2

0.4

ByoDyn

3,65936E1

1,99769E2

3,84316E-1

0,00000E0

1,85357E-2

5,95806E0

7,78983E-3

9,00000E-1

9,60789E0

2,11567E-1

4,19421E-2

0.4

Jarnac

3,65936E1

1,99769E2

3,84316E-1

0,00000E0

1,85370E-2

5,95806E0

7,78992E-3

9,00000E-1

9,60789E0

2,11573E-1

4,19424E-2

0.4

MathSBML

3,65936E1

1,99769E2

3,84316E-1

0,00000E0

1,85357E-2

5,95806E0

7,78984E-3

9,00000E-1

9,60789E0

2,11567E-1

4,19421E-2

0.4

Oscill8 Core

3,65936E1

1,99769E2

3,84315E-1

1,85380E-2

5,95806E0

9,00000E-1

9,60789E0

2,11579E-1

0.4

SBToolbox2

3,65936E1

1,99770E2

3,84320E-1

0,00000E0

1,85701E-2

5,95808E0

7,78990E-3

9,00000E-1

9,60788E0

2,11648E-1

4,19405E-2

0.4

SBWOdeSolver

3,65936E1

1,99769E2

3,84315E-1

0,00000E0

1,85380E-2

5,95806E0

7,79001E-3

9,00000E-1

9,60789E0

2,11579E-1

4,19428E-2

0.4

VCell

3,65936E1

1,99769E2

3,84316E-1

0,00000E0

1,85357E-2

5,95806E0

7,78983E-3

9,00000E-1

9,60789E0

2,11567E-1

4,19421E-2

0.4

copasi

3,65936E1

1,99769E2

3,84316E-1

0,00000E0

1,85357E-2

5,95806E0

7,78983E-3

9,00000E-1

9,60789E0

2,11567E-1

4,19421E-2

0.4

edu.kgi.roadRunner

3,65936E1

1,99769E2

3,84316E-1

0,00000E0

1,85357E-2

5,95806E0

7,78983E-3

9,00000E-1

9,60789E0

2,11567E-1

4,19421E-2

0.4

jsim

3,65936E1

1,99769E2

3,84316E-1

0,00000E0

1,85357E-2

5,95806E0

7,78983E-3

9,00000E-1

9,60789E0

2,11567E-1

4,19421E-2

0.4

min

3,65936E1

1,99769E2

3,84315E-1

0,00000E0

1,85357E-2

5,95806E0

7,78983E-3

9,00000E-1

9,60788E0

2,11567E-1

4,19405E-2

0.4

max

3,65936E1

1,99770E2

3,84320E-1

0,00000E0

1,85701E-2

5,95808E0

7,79001E-3

9,00000E-1

9,60789E0

2,11648E-1

4,19428E-2

0.4

mean

3,65936E1

1,99769E2

3,84316E-1

0,00000E0

1,85357E-2

5,95806E0

7,78983E-3

9,00000E-1

9,60789E0

2,11567E-1

4,19421E-2

0.4

relative error(%)

0,00

0.6

BioUML

3,90224E1

1,99259E2

5,65059E-1

0,00000E0

8,26848E-2

5,91187E0

1,72959E-2

9,00000E-1

9,41765E0

6,48481E-1

8,81329E-2

0.6

ByoDyn

3,90224E1

1,99259E2

5,65059E-1

0,00000E0

8,26848E-2

5,91187E0

1,72959E-2

9,00000E-1

9,41765E0

6,48481E-1

8,81329E-2

0.6

Jarnac

3,90224E1

1,99259E2

5,65058E-1

0,00000E0

8,26927E-2

5,91187E0

1,72962E-2

9,00000E-1

9,41765E0

6,48507E-1

8,81338E-2

0.6

MathSBML

3,90224E1

1,99259E2

5,65059E-1

0,00000E0

8,26849E-2

5,91187E0

1,72959E-2

9,00000E-1

9,41765E0

6,48481E-1

8,81329E-2

0.6

Oscill8 Core

3,90224E1

1,99259E2

5,65058E-1

8,26908E-2

5,91187E0

9,00000E-1

9,41765E0

6,48503E-1

0.6

SBToolbox2

3,90224E1

1,99262E2

5,65058E-1

0,00000E0

8,28021E-2

5,91186E0

1,72954E-2

9,00000E-1

9,41766E0

6,48624E-1

8,81267E-2

0.6

SBWOdeSolver

3,90224E1

1,99259E2

5,65058E-1

0,00000E0

8,26908E-2

5,91187E0

1,72962E-2

9,00000E-1

9,41765E0

6,48503E-1

8,81338E-2

0.6

VCell

3,90224E1

1,99259E2

5,65059E-1

0,00000E0

8,26848E-2

5,91187E0

1,72959E-2

9,00000E-1

9,41765E0

6,48481E-1

8,81329E-2

0.6

copasi

3,90224E1

1,99259E2

5,65059E-1

0,00000E0

8,26848E-2

5,91187E0

1,72959E-2

9,00000E-1

9,41765E0

6,48481E-1

8,81329E-2

0.6

edu.kgi.roadRunner

3,90224E1

1,99259E2

5,65059E-1

0,00000E0

8,26849E-2

5,91187E0

1,72959E-2

9,00000E-1

9,41765E0

6,48481E-1

8,81329E-2

0.6

jsim

3,90224E1

1,99259E2

5,65059E-1

0,00000E0

8,26848E-2

5,91187E0

1,72959E-2

9,00000E-1

9,41765E0

6,48481E-1

8,81329E-2

0.6

min

3,90224E1

1,99259E2

5,65058E-1

0,00000E0

8,26848E-2

5,91186E0

1,72954E-2

9,00000E-1

9,41765E0

6,48481E-1

8,81267E-2

0.6

max

3,90224E1

1,99262E2

5,65059E-1

0,00000E0

8,28021E-2

5,91187E0

1,72962E-2

9,00000E-1

9,41766E0

6,48624E-1

8,81338E-2

0.6

mean

3,90224E1

1,99259E2

5,65059E-1

0,00000E0

8,26849E-2

5,91187E0

1,72959E-2

9,00000E-1

9,41765E0

6,48481E-1

8,81329E-2

0.6

relative error(%)

0,00

0.8

BioUML

4,09735E1

1,98334E2

7,38493E-1

0,00000E0

2,32058E-1

5,85373E0

3,03435E-2

9,00000E-1

9,23116E0

1,39458E0

1,46269E-1

0.8

ByoDyn

4,09735E1

1,98334E2

7,38493E-1

0,00000E0

2,32058E-1

5,85373E0

3,03435E-2

9,00000E-1

9,23116E0

1,39458E0

1,46269E-1

0.8

Jarnac

4,09734E1

1,98333E2

7,38492E-1

0,00000E0

2,32085E-1

5,85373E0

3,03441E-2

9,00000E-1

9,23116E0

1,39465E0

1,46271E-1

0.8

MathSBML

4,09735E1

1,98334E2

7,38493E-1

0,00000E0

2,32058E-1

5,85373E0

3,03435E-2

9,00000E-1

9,23116E0

1,39458E0

1,46269E-1

0.8

Oscill8 Core

4,09734E1

1,98334E2

7,38492E-1

2,32069E-1

5,85373E0

9,00000E-1

9,23116E0

1,39461E0

0.8

SBToolbox2

4,09752E1

1,98335E2

7,38491E-1

0,00000E0

2,32320E-1

5,85375E0

3,03432E-2

9,00000E-1

9,23114E0

1,39479E0

1,46258E-1

0.8

SBWOdeSolver

4,09734E1

1,98334E2

7,38492E-1

0,00000E0

2,32069E-1

5,85373E0

3,03438E-2

9,00000E-1

9,23116E0

1,39461E0

1,46270E-1

0.8

VCell

4,09735E1

1,98334E2

7,38493E-1

0,00000E0

2,32058E-1

5,85373E0

3,03435E-2

9,00000E-1

9,23116E0

1,39458E0

1,46269E-1

0.8

copasi

4,09734E1

1,98334E2

7,38493E-1

0,00000E0

2,32058E-1

5,85373E0

3,03435E-2

9,00000E-1

9,23116E0

1,39458E0

1,46269E-1

0.8

edu.kgi.roadRunner

4,09734E1

1,98334E2

7,38493E-1

0,00000E0

2,32058E-1

5,85373E0

3,03435E-2

9,00000E-1

9,23116E0

1,39458E0

1,46269E-1

0.8

jsim

4,09735E1

1,98334E2

7,38493E-1

0,00000E0

2,32058E-1

5,85373E0

3,03435E-2

9,00000E-1

9,23116E0

1,39458E0

1,46269E-1

0.8

min

4,09734E1

1,98333E2

7,38491E-1

0,00000E0

2,32058E-1

5,85373E0

3,03432E-2

9,00000E-1

9,23114E0

1,39458E0

1,46258E-1

0.8

max

4,09752E1

1,98335E2

7,38493E-1

0,00000E0

2,32320E-1

5,85375E0

3,03441E-2

9,00000E-1

9,23116E0

1,39479E0

1,46271E-1

0.8

mean

4,09734E1

1,98334E2

7,38493E-1

0,00000E0

2,32058E-1

5,85373E0

3,03435E-2

9,00000E-1

9,23116E0

1,39458E0

1,46269E-1

0.8

relative error(%)

0,00

1.0

BioUML

4,21560E1

1,96917E2

9,04837E-1

0,00000E0

5,03628E-1

5,78669E0

4,67884E-2

9,00000E-1

9,04837E0

2,46811E0

2,13308E-1

1.0

ByoDyn

4,21560E1

1,96917E2

9,04837E-1

0,00000E0

5,03628E-1

5,78669E0

4,67884E-2

9,00000E-1

9,04837E0

2,46811E0

2,13308E-1

1.0

Jarnac

4,21555E1

1,96917E2

9,04834E-1

0,00000E0

5,03697E-1

5,78669E0

4,67898E-2

9,00000E-1

9,04838E0

2,46825E0

2,13311E-1

1.0

MathSBML

4,21560E1

1,96917E2

9,04837E-1

0,00000E0

5,03628E-1

5,78669E0

4,67884E-2

9,00000E-1

9,04837E0

2,46811E0

2,13308E-1

1.0

Oscill8 Core

4,21558E1

1,96917E2

9,04837E-1

5,03645E-1

5,78669E0

9,00000E-1

9,04837E0

2,46814E0

1.0

SBToolbox2

4,21707E1

1,96918E2

9,04845E-1

0,00000E0

5,04115E-1

5,78675E0

4,67869E-2

9,00000E-1

9,04840E0

2,46816E0

2,13287E-1

1.0

SBWOdeSolver

4,21559E1

1,96917E2

9,04837E-1

0,00000E0

5,03645E-1

5,78669E0

4,67888E-2

9,00000E-1

9,04837E0

2,46814E0

2,13309E-1

1.0

VCell

4,21560E1

1,96917E2

9,04837E-1

0,00000E0

5,03628E-1

5,78669E0

4,67884E-2

9,00000E-1

9,04837E0

2,46811E0

2,13308E-1

1.0

copasi

4,21561E1

1,96917E2

9,04837E-1

0,00000E0

5,03628E-1

5,78669E0

4,67884E-2

9,00000E-1

9,04837E0

2,46811E0

2,13308E-1

1.0

edu.kgi.roadRunner

4,21564E1

1,96917E2

9,04837E-1

0,00000E0

5,03628E-1

5,78669E0

4,67884E-2

9,00000E-1

9,04837E0

2,46811E0

2,13308E-1

1.0

jsim

4,21560E1

1,96917E2

9,04837E-1

0,00000E0

5,03628E-1

5,78669E0

4,67884E-2

9,00000E-1

9,04837E0

2,46811E0

2,13308E-1

1.0

min

4,21555E1

1,96917E2

9,04834E-1

0,00000E0

5,03628E-1

5,78669E0

4,67869E-2

9,00000E-1

9,04837E0

2,46811E0

2,13287E-1

1.0

max

4,21707E1

1,96918E2

9,04845E-1

0,00000E0

5,04115E-1

5,78675E0

4,67898E-2

9,00000E-1

9,04840E0

2,46825E0

2,13311E-1

1.0

mean

4,21560E1

1,96917E2

9,04837E-1

0,00000E0

5,03628E-1

5,78669E0

4,67884E-2

9,00000E-1

9,04837E0

2,46811E0

2,13308E-1

1.0

relative error(%)

0,00

1.2

BioUML

4,11624E1

1,94961E2

1,06430E0

0,00000E0

9,28163E-1

5,71334E0

6,64911E-2

9,00000E-1

8,86920E0

3,85912E0

2,86659E-1

1.2

ByoDyn

4,11624E1

1,94961E2

1,06430E0

0,00000E0

9,28163E-1

5,71334E0

6,64911E-2

9,00000E-1

8,86920E0

3,85912E0

2,86659E-1

1.2

Jarnac

4,11603E1

1,94961E2

1,06430E0

0,00000E0

9,28295E-1

5,71334E0

6,64934E-2

9,00000E-1

8,86921E0

3,85934E0

2,86662E-1

1.2

MathSBML

4,11624E1

1,94961E2

1,06430E0

0,00000E0

9,28163E-1

5,71334E0

6,64911E-2

9,00000E-1

8,86920E0

3,85912E0

2,86659E-1

1.2

Oscill8 Core

4,11620E1

1,94961E2

1,06430E0

9,28186E-1

5,71334E0

9,00000E-1

8,86920E0

3,85916E0

1.2

SBToolbox2

4,11691E1

1,94963E2

1,06426E0

0,00000E0

9,28884E-1

5,71336E0

6,64874E-2

9,00000E-1

8,86917E0

3,85887E0

2,86625E-1

1.2

SBWOdeSolver

4,11618E1

1,94961E2

1,06430E0

0,00000E0

9,28186E-1

5,71334E0

6,64915E-2

9,00000E-1

8,86920E0

3,85916E0

2,86660E-1

1.2

VCell

4,11624E1

1,94961E2

1,06430E0

0,00000E0

9,28163E-1

5,71334E0

6,64911E-2

9,00000E-1

8,86920E0

3,85912E0

2,86659E-1

1.2

copasi

4,11625E1

1,94961E2

1,06430E0

0,00000E0

9,28163E-1

5,71334E0

6,64911E-2

9,00000E-1

8,86920E0

3,85912E0

2,86659E-1

1.2

edu.kgi.roadRunner

4,11629E1

1,94961E2

1,06430E0

0,00000E0

9,28163E-1

5,71334E0

6,64911E-2

9,00000E-1

8,86920E0

3,85912E0

2,86659E-1

1.2

jsim

4,11624E1

1,94961E2

1,06430E0

0,00000E0

9,28163E-1

5,71334E0

6,64911E-2

9,00000E-1

8,86920E0

3,85912E0

2,86659E-1

1.2

min

4,11603E1

1,94961E2

1,06426E0

0,00000E0

9,28163E-1

5,71334E0

6,64874E-2

9,00000E-1

8,86917E0

3,85887E0

2,86625E-1

1.2

max

4,11691E1

1,94963E2

1,06430E0

0,00000E0

9,28884E-1

5,71336E0

6,64934E-2

9,00000E-1

8,86921E0

3,85934E0

2,86662E-1

1.2

mean

4,11624E1

1,94961E2

1,06430E0

0,00000E0

9,28163E-1

5,71334E0

6,64911E-2

9,00000E-1

8,86920E0

3,85912E0

2,86659E-1

1.2

relative error(%)

0,00

1.4

BioUML

3,70201E1

1,92442E2

1,21710E0

0,00000E0

1,52738E0

5,63585E0

8,93161E-2

9,00000E-1

8,69358E0

5,53665E0

3,64146E-1

1.4

ByoDyn

3,70201E1

1,92442E2

1,21710E0

0,00000E0

1,52738E0

5,63585E0

8,93161E-2

9,00000E-1

8,69358E0

5,53665E0

3,64146E-1

1.4

Jarnac

3,70168E1

1,92442E2

1,21709E0

0,00000E0

1,52759E0

5,63585E0

8,93194E-2

9,00000E-1

8,69359E0

5,53694E0

3,64149E-1

1.4

MathSBML

3,70201E1

1,92442E2

1,21710E0

0,00000E0

1,52738E0

5,63585E0

8,93161E-2

9,00000E-1

8,69358E0

5,53665E0

3,64146E-1

1.4

Oscill8 Core

3,70200E1

1,92442E2

1,21710E0

1,52741E0

5,63585E0

9,00000E-1

8,69358E0

5,53668E0

1.4

SBToolbox2

3,69850E1

1,92440E2

1,21715E0

0,00000E0

1,52798E0

5,63586E0

8,93108E-2

9,00000E-1

8,69362E0

5,53597E0

3,64107E-1

1.4

SBWOdeSolver

3,70199E1

1,92442E2

1,21710E0

0,00000E0

1,52741E0

5,63585E0

8,93166E-2

9,00000E-1

8,69358E0

5,53668E0

3,64146E-1

1.4

VCell

3,70201E1

1,92442E2

1,21710E0

0,00000E0

1,52738E0

5,63585E0

8,93161E-2

9,00000E-1

8,69358E0

5,53665E0

3,64146E-1

1.4

copasi

3,70202E1

1,92442E2

1,21710E0

0,00000E0

1,52738E0

5,63585E0

8,93161E-2

9,00000E-1

8,69358E0

5,53665E0

3,64146E-1

1.4

edu.kgi.roadRunner

3,70202E1

1,92442E2

1,21710E0

0,00000E0

1,52738E0

5,63585E0

8,93161E-2

9,00000E-1

8,69358E0

5,53665E0

3,64146E-1

1.4

jsim

3,70201E1

1,92442E2

1,21710E0

0,00000E0

1,52738E0

5,63585E0

8,93161E-2

9,00000E-1

8,69358E0

5,53665E0

3,64146E-1

1.4

min

3,69850E1

1,92440E2

1,21709E0

0,00000E0

1,52738E0

5,63585E0

8,93108E-2

9,00000E-1

8,69358E0

5,53597E0

3,64107E-1

1.4

max

3,70202E1

1,92442E2

1,21715E0

0,00000E0

1,52798E0

5,63586E0

8,93194E-2

9,00000E-1

8,69362E0

5,53694E0

3,64149E-1

1.4

mean

3,70201E1

1,92442E2

1,21710E0

0,00000E0

1,52738E0

5,63585E0

8,93161E-2

9,00000E-1

8,69358E0

5,53665E0

3,64146E-1

1.4

relative error(%)

0,00

1.6

BioUML

3,15047E1

1,89358E2

1,36343E0

0,00000E0

2,31269E0

5,55603E0

1,15132E-1

9,00000E-1

8,52144E0

7,45495E0

4,43966E-1

1.6

ByoDyn

3,15047E1

1,89358E2

1,36343E0

0,00000E0

2,31269E0

5,55603E0

1,15132E-1

9,00000E-1

8,52144E0

7,45495E0

4,43966E-1

1.6

Jarnac

3,15014E1

1,89357E2

1,36342E0

0,00000E0

2,31302E0

5,55603E0

1,15137E-1

9,00000E-1

8,52144E0

7,45531E0

4,43968E-1

1.6

MathSBML

3,15047E1

1,89358E2

1,36343E0

0,00000E0

2,31269E0

5,55603E0

1,15132E-1

9,00000E-1

8,52144E0

7,45495E0

4,43966E-1

1.6

Oscill8 Core

3,15047E1

1,89358E2

1,36343E0

2,31272E0

5,55603E0

9,00000E-1

8,52144E0

7,45498E0

1.6

SBToolbox2

3,14536E1

1,89357E2

1,36345E0

0,00000E0

2,31308E0

5,55606E0

1,15122E-1

9,00000E-1

8,52146E0

7,45394E0

4,43925E-1

1.6

SBWOdeSolver

3,15047E1

1,89358E2

1,36343E0

0,00000E0

2,31272E0

5,55603E0

1,15133E-1

9,00000E-1

8,52144E0

7,45498E0

4,43966E-1

1.6

VCell

3,15047E1

1,89358E2

1,36343E0

0,00000E0

2,31269E0

5,55603E0

1,15132E-1

9,00000E-1

8,52144E0

7,45495E0

4,43966E-1

1.6

copasi

3,15047E1

1,89358E2

1,36343E0

0,00000E0

2,31269E0

5,55603E0

1,15132E-1

9,00000E-1

8,52144E0

7,45495E0

4,43966E-1

1.6

edu.kgi.roadRunner

3,15049E1

1,89358E2

1,36343E0

0,00000E0

2,31269E0

5,55603E0

1,15132E-1

9,00000E-1

8,52144E0

7,45495E0

4,43966E-1

1.6

jsim

3,15047E1

1,89358E2

1,36343E0

0,00000E0

2,31269E0

5,55603E0

1,15132E-1

9,00000E-1

8,52144E0

7,45495E0

4,43966E-1

1.6

min

3,14536E1

1,89357E2

1,36342E0

0,00000E0

2,31269E0

5,55603E0

1,15122E-1

9,00000E-1

8,52144E0

7,45394E0

4,43925E-1

1.6

max

3,15049E1

1,89358E2

1,36345E0

0,00000E0

2,31308E0

5,55606E0

1,15137E-1

9,00000E-1

8,52146E0

7,45531E0

4,43968E-1

1.6

mean

3,15047E1

1,89358E2

1,36343E0

0,00000E0

2,31269E0

5,55603E0

1,15132E-1

9,00000E-1

8,52144E0

7,45495E0

4,43966E-1

1.6

relative error(%)

0,00

1.8

BioUML

2,62110E1

1,85725E2

1,50349E0

0,00000E0

3,28514E0

5,47535E0

1,43812E-1

9,00000E-1

8,35270E0

9,55890E0

5,24649E-1

1.8

ByoDyn

2,62110E1

1,85725E2

1,50349E0

0,00000E0

3,28514E0

5,47535E0

1,43812E-1

9,00000E-1

8,35270E0

9,55890E0

5,24649E-1

1.8

Jarnac

2,62086E1

1,85724E2

1,50347E0

0,00000E0

3,28563E0

5,47535E0

1,43819E-1

9,00000E-1

8,35271E0

9,55932E0

5,24649E-1

1.8

MathSBML

2,62110E1

1,85725E2

1,50349E0

0,00000E0

3,28514E0

5,47535E0

1,43812E-1

9,00000E-1

8,35270E0

9,55890E0

5,24649E-1

1.8

Oscill8 Core

2,62111E1

1,85725E2

1,50349E0

3,28517E0

5,47535E0

9,00000E-1

8,35270E0

9,55892E0

1.8

SBToolbox2

2,61540E1

1,85724E2

1,50348E0

0,00000E0

3,28516E0

5,47542E0

1,43800E-1

9,00000E-1

8,35271E0

9,55773E0

5,24615E-1

1.8

SBWOdeSolver

2,62111E1

1,85725E2

1,50349E0

0,00000E0

3,28517E0

5,47535E0

1,43812E-1

9,00000E-1

8,35270E0

9,55892E0

5,24648E-1

1.8

VCell

2,62110E1

1,85725E2

1,50349E0

0,00000E0

3,28514E0

5,47535E0

1,43812E-1

9,00000E-1

8,35270E0

9,55890E0

5,24649E-1

1.8

copasi

2,62110E1

1,85725E2

1,50349E0

0,00000E0

3,28514E0

5,47535E0

1,43812E-1

9,00000E-1

8,35270E0

9,55890E0

5,24649E-1

1.8

edu.kgi.roadRunner

2,62110E1

1,85725E2

1,50349E0

0,00000E0

3,28514E0

5,47535E0

1,43812E-1

9,00000E-1

8,35270E0

9,55890E0

5,24649E-1

1.8

jsim

2,62110E1

1,85725E2

1,50349E0

0,00000E0

3,28514E0

5,47535E0

1,43812E-1

9,00000E-1

8,35270E0

9,55890E0

5,24649E-1

1.8

min

2,61540E1

1,85724E2

1,50347E0

0,00000E0

3,28514E0

5,47535E0

1,43800E-1

9,00000E-1

8,35270E0

9,55773E0

5,24615E-1

1.8

max

2,62111E1

1,85725E2

1,50349E0

0,00000E0

3,28563E0

5,47542E0

1,43819E-1

9,00000E-1

8,35271E0

9,55932E0

5,24649E-1

1.8

mean

2,62110E1

1,85725E2

1,50349E0

0,00000E0

3,28514E0

5,47535E0

1,43812E-1

9,00000E-1

8,35270E0

9,55890E0

5,24649E-1

1.8

relative error(%)

0,00

2.0

BioUML

2,16207E1

1,81575E2

1,63746E0

0,00000E0

4,43617E0

5,39499E0

1,75231E-1

9,00000E-1

8,18731E0

1,17886E1

6,05014E-1

2.0

ByoDyn

2,16207E1

1,81575E2

1,63746E0

0,00000E0

4,43617E0

5,39499E0

1,75231E-1

9,00000E-1

8,18731E0

1,17886E1

6,05014E-1

2.0

Jarnac

2,16195E1

1,81573E2

1,63744E0

0,00000E0

4,43681E0

5,39499E0

1,75241E-1

9,00000E-1

8,18732E0

1,17890E1

6,05012E-1

2.0

MathSBML

2,16207E1

1,81575E2

1,63746E0

0,00000E0

4,43617E0

5,39499E0

1,75231E-1

9,00000E-1

8,18731E0

1,17886E1

6,05014E-1

2.0

Oscill8 Core

2,16209E1

1,81575E2

1,63746E0

4,43620E0

5,39499E0

9,00000E-1

8,18731E0

1,17886E1

2.0

SBToolbox2

2,15662E1

1,81574E2

1,63748E0

0,00000E0

4,43548E0

5,39500E0

1,75222E-1

9,00000E-1

8,18734E0

1,17872E1

6,04982E-1

2.0

SBWOdeSolver

2,16206E1

1,81575E2

1,63746E0

0,00000E0

4,43623E0

5,39499E0

1,75231E-1

9,00000E-1

8,18731E0

1,17886E1

6,05014E-1

2.0

VCell

2,16207E1

1,81575E2

1,63746E0

0,00000E0

4,43617E0

5,39499E0

1,75231E-1

9,00000E-1

8,18731E0

1,17886E1

6,05014E-1

2.0

copasi

2,16208E1

1,81575E2

1,63746E0

0,00000E0

4,43617E0

5,39499E0

1,75231E-1

9,00000E-1

8,18731E0

1,17886E1

6,05014E-1

2.0

edu.kgi.roadRunner

2,16207E1

1,81575E2

1,63746E0

0,00000E0

4,43617E0

5,39499E0

1,75231E-1

9,00000E-1

8,18731E0

1,17886E1

6,05014E-1

2.0

jsim

2,16207E1

1,81575E2

1,63746E0

0,00000E0

4,43617E0

5,39499E0

1,75231E-1

9,00000E-1

8,18731E0

1,17886E1

6,05014E-1

2.0

min

2,15662E1

1,81573E2

1,63744E0

0,00000E0

4,43548E0

5,39499E0

1,75222E-1

9,00000E-1

8,18731E0

1,17872E1

6,04982E-1

2.0

max

2,16209E1

1,81575E2

1,63748E0

0,00000E0

4,43681E0

5,39500E0

1,75241E-1

9,00000E-1

8,18734E0

1,17890E1

6,05014E-1

2.0

mean

2,16207E1

1,81575E2

1,63746E0

0,00000E0

4,43617E0

5,39499E0

1,75231E-1

9,00000E-1

8,18731E0

1,17886E1

6,05014E-1

2.0

relative error(%)

0,00

2.2

BioUML

1,77716E1

1,76953E2

1,76554E0

0,00000E0

5,74894E0

5,31586E0

2,09271E-1

9,00000E-1

8,02519E0

1,40834E1

6,84136E-1

2.2

ByoDyn

1,77716E1

1,76953E2

1,76554E0

0,00000E0

5,74894E0

5,31586E0

2,09271E-1

9,00000E-1

8,02519E0

1,40834E1

6,84136E-1

2.2

Jarnac

1,77714E1

1,76950E2

1,76551E0

0,00000E0

5,74970E0

5,31587E0

2,09283E-1

9,00000E-1

8,02520E0

1,40837E1

6,84130E-1

2.2

MathSBML

1,77716E1

1,76953E2

1,76554E0

0,00000E0

5,74894E0

5,31586E0

2,09271E-1

9,00000E-1

8,02519E0

1,40834E1

6,84136E-1

2.2

Oscill8 Core

1,77717E1

1,76953E2

1,76554E0

5,74897E0

5,31586E0

9,00000E-1

8,02519E0

1,40834E1

2.2

SBToolbox2

1,77195E1

1,76953E2

1,76554E0

0,00000E0

5,74728E0

5,31586E0

2,09253E-1

9,00000E-1

8,02516E0

1,40817E1

6,84118E-1

2.2

SBWOdeSolver

1,77715E1

1,76953E2

1,76554E0

0,00000E0

5,74899E0

5,31586E0

2,09271E-1

9,00000E-1

8,02519E0

1,40834E1

6,84136E-1

2.2

VCell

1,77716E1

1,76953E2

1,76554E0

0,00000E0

5,74894E0

5,31586E0

2,09271E-1

9,00000E-1

8,02519E0

1,40834E1

6,84136E-1

2.2

copasi

1,77716E1

1,76953E2

1,76554E0

0,00000E0

5,74894E0

5,31586E0

2,09271E-1

9,00000E-1

8,02519E0

1,40834E1

6,84136E-1

2.2

edu.kgi.roadRunner

1,77715E1

1,76953E2

1,76554E0

0,00000E0

5,74894E0

5,31586E0

2,09271E-1

9,00000E-1

8,02519E0

1,40834E1

6,84136E-1

2.2

jsim

1,77716E1

1,76953E2

1,76554E0

0,00000E0

5,74894E0

5,31586E0

2,09271E-1

9,00000E-1

8,02519E0

1,40834E1

6,84136E-1

2.2

min

1,77195E1

1,76950E2

1,76551E0

0,00000E0

5,74728E0

5,31586E0

2,09253E-1

9,00000E-1

8,02516E0

1,40817E1

6,84118E-1

2.2

max

1,77717E1

1,76953E2

1,76554E0

0,00000E0

5,74970E0

5,31587E0

2,09283E-1

9,00000E-1

8,02520E0

1,40837E1

6,84136E-1

2.2

mean

1,77716E1

1,76953E2

1,76554E0

0,00000E0

5,74894E0

5,31586E0

2,09271E-1

9,00000E-1

8,02519E0

1,40834E1

6,84136E-1

2.2

relative error(%)

0,00

2.4

BioUML

1,45840E1

1,71909E2

1,88791E0

0,00000E0

7,20001E0

5,23870E0

2,45815E-1

9,00000E-1

7,86628E0

1,63845E1

7,61301E-1

2.4

ByoDyn

1,45840E1

1,71909E2

1,88791E0

0,00000E0

7,20001E0

5,23870E0

2,45815E-1

9,00000E-1

7,86628E0

1,63845E1

7,61301E-1

2.4

Jarnac

1,45847E1

1,71906E2

1,88787E0

0,00000E0

7,20084E0

5,23871E0

2,45830E-1

9,00000E-1

7,86630E0

1,63846E1

7,61289E-1

2.4

MathSBML

1,45840E1

1,71909E2

1,88791E0

0,00000E0

7,20001E0

5,23870E0

2,45815E-1

9,00000E-1

7,86628E0

1,63845E1

7,61301E-1

2.4

Oscill8 Core

1,45842E1

1,71909E2

1,88791E0

7,20004E0

5,23870E0

9,00000E-1

7,86628E0

1,63845E1

2.4

SBToolbox2

1,45348E1

1,71905E2

1,88796E0

0,00000E0

7,19728E0

5,23871E0

2,45796E-1

9,00000E-1

7,86630E0

1,63836E1

7,61298E-1

2.4

SBWOdeSolver

1,45840E1

1,71909E2

1,88791E0

0,00000E0

7,20006E0

5,23870E0

2,45815E-1

9,00000E-1

7,86628E0

1,63845E1

7,61300E-1

2.4

VCell

1,45840E1

1,71909E2

1,88791E0

0,00000E0

7,20001E0

5,23870E0

2,45815E-1

9,00000E-1

7,86628E0

1,63845E1

7,61301E-1

2.4

copasi

1,45840E1

1,71909E2

1,88791E0

0,00000E0

7,20001E0

5,23870E0

2,45815E-1

9,00000E-1

7,86628E0

1,63845E1

7,61301E-1

2.4

edu.kgi.roadRunner

1,45840E1

1,71909E2

1,88791E0

0,00000E0

7,20001E0

5,23870E0

2,45815E-1

9,00000E-1

7,86628E0

1,63845E1

7,61301E-1

2.4

jsim

1,45840E1

1,71909E2

1,88791E0

0,00000E0

7,20001E0

5,23870E0

2,45815E-1

9,00000E-1

7,86628E0

1,63845E1

7,61301E-1

2.4

min

1,45348E1

1,71905E2

1,88787E0

0,00000E0

7,19728E0

5,23870E0

2,45796E-1

9,00000E-1

7,86628E0

1,63836E1

7,61289E-1

2.4

max

1,45847E1

1,71909E2

1,88796E0

0,00000E0

7,20084E0

5,23871E0

2,45830E-1

9,00000E-1

7,86630E0

1,63846E1

7,61301E-1

2.4

mean

1,45840E1

1,71909E2

1,88791E0

0,00000E0

7,20001E0

5,23870E0

2,45815E-1

9,00000E-1

7,86628E0

1,63845E1

7,61301E-1

2.4

relative error(%)

0,00

2.6

BioUML

1,19584E1

1,66503E2

2,00473E0

0,00000E0

8,76122E0

5,16402E0

2,84750E-1

9,00000E-1

7,71052E0

1,86378E1

8,35977E-1

2.6

ByoDyn

1,19584E1

1,66503E2

2,00473E0

0,00000E0

8,76122E0

5,16402E0

2,84750E-1

9,00000E-1

7,71052E0

1,86378E1

8,35977E-1

2.6

Jarnac

1,19596E1

1,66500E2

2,00469E0

0,00000E0

8,76201E0

5,16404E0

2,84768E-1

9,00000E-1

7,71054E0

1,86376E1

8,35960E-1

2.6

MathSBML

1,19584E1

1,66503E2

2,00473E0

0,00000E0

8,76122E0

5,16402E0

2,84750E-1

9,00000E-1

7,71052E0

1,86378E1

8,35977E-1

2.6

Oscill8 Core

1,19585E1

1,66503E2

2,00473E0

8,76124E0

5,16402E0

9,00000E-1

7,71052E0

1,86378E1

2.6

SBToolbox2

1,19139E1

1,66503E2

2,00479E0

0,00000E0

8,75757E0

5,16396E0

2,84727E-1

9,00000E-1

7,71050E0

1,86384E1

8,35996E-1

2.6

SBWOdeSolver

1,19584E1

1,66503E2

2,00473E0

0,00000E0

8,76125E0

5,16402E0

2,84751E-1

9,00000E-1

7,71052E0

1,86378E1

8,35976E-1

2.6

VCell

1,19584E1

1,66503E2

2,00473E0

0,00000E0

8,76122E0

5,16402E0

2,84750E-1

9,00000E-1

7,71052E0

1,86378E1

8,35977E-1

2.6

copasi

1,19584E1

1,66503E2

2,00473E0

0,00000E0

8,76122E0

5,16402E0

2,84750E-1

9,00000E-1

7,71052E0

1,86378E1

8,35977E-1

2.6

edu.kgi.roadRunner

1,19583E1

1,66503E2

2,00473E0

0,00000E0

8,76122E0

5,16402E0

2,84750E-1

9,00000E-1

7,71052E0

1,86378E1

8,35977E-1

2.6

jsim

1,19584E1

1,66503E2

2,00473E0

0,00000E0

8,76122E0

5,16402E0

2,84750E-1

9,00000E-1

7,71052E0

1,86378E1

8,35977E-1

2.6

min

1,19139E1

1,66500E2

2,00469E0

0,00000E0

8,75757E0

5,16396E0

2,84727E-1

9,00000E-1

7,71050E0

1,86376E1

8,35960E-1

2.6

max

1,19596E1

1,66503E2

2,00479E0

Test: BIOMD0000000037.xml - Ok

Reaction graph

Plots

Comparison with other simulators