Test BIOMD0000000055.xml details

Test: BIOMD0000000055.xml - Ok

test	: BIOMD0000000055.xml
model	: xml, reaction graph
simulator engine	: DormandPrince
generated code	: BIOMD0000000055.java
results	: CSV file
plots	: plot
comparison	: comparison with other simulators
status	: Ok
simulation time	: 0 s.

Parameters:
ZERO 1.0E-100
ATOL 1.0E-15
RTOL 1.0E-12
STEP 0.01

Text color indicates difference between values:
- no significant difference ( < 0.1%)
- small relative error ( > 0.1% and <50%)
- simulation results significantly differ ( >50%)

Variables: cLc cYc cXc cPn cYm cTn cTm cXm cXn cTc cLm cLn cYn
Simulators: ByoDyn copasi edu.kgi.roadRunner SBToolbox2 VCell SBWOdeSolver MathSBML BioUML

time

result

cLc

cYc

cXc

cPn

cYm

cTn

cTm

cXm

cXn

cTc

cLm

cLn

cYn

0.0

BioUML

1,50000E-2

4,00000E-3

1,34000E0

8,35000E-1

3,70000E-2

4,00000E-1

4,56000E-1

8,00000E-2

4,00000E-1

8,70000E0

5,39000E-1

8,55000E-2

1,30000E-2

0.0

ByoDyn

1,50000E-2

4,00000E-3

1,34000E0

8,35000E-1

3,70000E-2

4,00000E-1

4,56000E-1

8,00000E-2

4,00000E-1

8,70000E0

5,39000E-1

8,55000E-2

1,30000E-2

0.0

MathSBML

1,50000E-2

4,00000E-3

1,34000E0

8,35000E-1

3,70000E-2

4,00000E-1

4,56000E-1

8,00000E-2

4,00000E-1

8,70000E0

5,39000E-1

8,55000E-2

1,30000E-2

0.0

SBToolbox2

1,50000E-2

4,00000E-3

1,34000E0

8,35000E-1

3,70000E-2

4,00000E-1

4,56000E-1

8,00000E-2

4,00000E-1

8,70000E0

5,39000E-1

8,55000E-2

1,30000E-2

0.0

SBWOdeSolver

1,50000E-2

4,00000E-3

1,34000E0

8,35000E-1

3,70000E-2

4,00000E-1

4,56000E-1

8,00000E-2

4,00000E-1

8,70000E0

5,39000E-1

8,55000E-2

1,30000E-2

0.0

VCell

1,50000E-2

4,00000E-3

1,34000E0

8,35000E-1

3,70000E-2

4,00000E-1

4,56000E-1

8,00000E-2

4,00000E-1

8,70000E0

5,39000E-1

8,55000E-2

1,30000E-2

0.0

copasi

1,50000E-2

4,00000E-3

1,34000E0

8,35000E-1

3,70000E-2

4,00000E-1

4,56000E-1

8,00000E-2

4,00000E-1

8,70000E0

5,39000E-1

8,55000E-2

1,30000E-2

0.0

edu.kgi.roadRunner

1,50000E-2

4,00000E-3

1,34000E0

8,35000E-1

3,70000E-2

4,00000E-1

4,56000E-1

8,00000E-2

4,00000E-1

8,70000E0

5,39000E-1

8,55000E-2

1,30000E-2

0.0

min

1,50000E-2

4,00000E-3

1,34000E0

8,35000E-1

3,70000E-2

4,00000E-1

4,56000E-1

8,00000E-2

4,00000E-1

8,70000E0

5,39000E-1

8,55000E-2

1,30000E-2

0.0

max

1,50000E-2

4,00000E-3

1,34000E0

8,35000E-1

3,70000E-2

4,00000E-1

4,56000E-1

8,00000E-2

4,00000E-1

8,70000E0

5,39000E-1

8,55000E-2

1,30000E-2

0.0

mean

1,50000E-2

4,00000E-3

1,34000E0

8,35000E-1

3,70000E-2

4,00000E-1

4,56000E-1

8,00000E-2

4,00000E-1

8,70000E0

5,39000E-1

8,55000E-2

1,30000E-2

0.0

relative error(%)

0,00

0.2

BioUML

2,35777E-2

7,27119E-3

1,33106E0

6,02966E-1

1,52019E-1

3,73825E-1

4,58767E-1

7,50099E-2

3,97851E-1

8,24625E0

8,73836E-1

9,82556E-2

1,39100E-2

0.2

ByoDyn

2,35777E-2

7,27119E-3

1,33106E0

6,02966E-1

1,52019E-1

3,73825E-1

4,58767E-1

7,50099E-2

3,97851E-1

8,24625E0

8,73836E-1

9,82556E-2

1,39100E-2

0.2

MathSBML

2,35777E-2

7,27119E-3

1,33106E0

6,02966E-1

1,52019E-1

3,73825E-1

4,58767E-1

7,50099E-2

3,97851E-1

8,24625E0

8,73836E-1

9,82556E-2

1,39100E-2

0.2

SBToolbox2

2,35777E-2

7,26425E-3

1,33101E0

6,02942E-1

1,52044E-1

3,73828E-1

4,58777E-1

7,50098E-2

3,97852E-1

8,24624E0

8,73880E-1

9,82291E-2

1,39103E-2

0.2

SBWOdeSolver

2,35777E-2

7,27121E-3

1,33106E0

6,02967E-1

1,52017E-1

3,73825E-1

4,58767E-1

7,50099E-2

3,97851E-1

8,24625E0

8,73833E-1

9,82559E-2

1,39101E-2

0.2

VCell

1,98757E-2

5,91898E-3

1,33105E0

7,13860E-1

9,79709E-2

3,72262E-1

4,58891E-1

7,49753E-2

3,97851E-1

8,24582E0

7,20568E-1

9,33228E-2

1,36921E-2

0.2

copasi

2,35777E-2

7,27119E-3

1,33106E0

6,02966E-1

1,52019E-1

3,73825E-1

4,58767E-1

7,50099E-2

3,97851E-1

8,24625E0

8,73836E-1

9,82556E-2

1,39100E-2

0.2

edu.kgi.roadRunner

2,35777E-2

7,27119E-3

1,33106E0

6,02966E-1

1,52019E-1

3,73825E-1

4,58767E-1

7,50099E-2

3,97851E-1

8,24625E0

8,73836E-1

9,82556E-2

1,39100E-2

0.2

min

1,98757E-2

5,91898E-3

1,33101E0

6,02942E-1

9,79709E-2

3,72262E-1

4,58767E-1

7,49753E-2

3,97851E-1

8,24582E0

7,20568E-1

9,33228E-2

1,36921E-2

0.2

max

2,35777E-2

7,27121E-3

1,33106E0

7,13860E-1

1,52044E-1

3,73828E-1

4,58891E-1

7,50099E-2

3,97852E-1

8,24625E0

8,73880E-1

9,82559E-2

1,39103E-2

0.2

mean

2,35777E-2

7,27119E-3

1,33106E0

6,02966E-1

1,52019E-1

3,73825E-1

4,58767E-1

7,50099E-2

3,97851E-1

8,24625E0

8,73836E-1

9,82556E-2

1,39100E-2

0.2

relative error(%)

0,00

0.4

BioUML

3,02396E-2

1,19986E-2

1,32058E0

4,29030E-1

1,82055E-1

3,46186E-1

4,64459E-1

7,02858E-2

3,95318E-1

7,81840E0

1,08705E0

1,26541E-1

1,65786E-2

0.4

ByoDyn

3,02396E-2

1,19986E-2

1,32058E0

4,29030E-1

1,82055E-1

3,46186E-1

4,64459E-1

7,02858E-2

3,95318E-1

7,81840E0

1,08705E0

1,26541E-1

1,65786E-2

0.4

MathSBML

3,02396E-2

1,19986E-2

1,32058E0

4,29030E-1

1,82055E-1

3,46186E-1

4,64459E-1

7,02858E-2

3,95318E-1

7,81840E0

1,08705E0

1,26541E-1

1,65786E-2

0.4

SBToolbox2

3,02424E-2

1,19884E-2

1,32062E0

4,28950E-1

1,82102E-1

3,46185E-1

4,64513E-1

7,02863E-2

3,95316E-1

7,81843E0

1,08717E0

1,26488E-1

1,65730E-2

0.4

SBWOdeSolver

3,02395E-2

1,19986E-2

1,32058E0

4,29032E-1

1,82053E-1

3,46186E-1

4,64460E-1

7,02858E-2

3,95318E-1

7,81840E0

1,08705E0

1,26541E-1

1,65786E-2

0.4

VCell

2,40499E-2

8,76493E-3

1,32054E0

6,12533E-1

1,22670E-1

3,44104E-1

4,64226E-1

7,01878E-2

3,95315E-1

7,81720E0

8,59752E-1

1,09967E-1

1,53932E-2

0.4

copasi

3,02396E-2

1,19986E-2

1,32058E0

4,29030E-1

1,82055E-1

3,46186E-1

4,64459E-1

7,02858E-2

3,95318E-1

7,81840E0

1,08705E0

1,26541E-1

1,65786E-2

0.4

edu.kgi.roadRunner

3,02396E-2

1,19986E-2

1,32058E0

4,29030E-1

1,82055E-1

3,46186E-1

4,64459E-1

7,02858E-2

3,95318E-1

7,81840E0

1,08705E0

1,26541E-1

1,65786E-2

0.4

min

2,40499E-2

8,76493E-3

1,32054E0

4,28950E-1

1,22670E-1

3,44104E-1

4,64226E-1

7,01878E-2

3,95315E-1

7,81720E0

8,59752E-1

1,09967E-1

1,53932E-2

0.4

max

3,02424E-2

1,19986E-2

1,32062E0

6,12533E-1

1,82102E-1

3,46186E-1

4,64513E-1

7,02863E-2

3,95318E-1

7,81843E0

1,08717E0

1,26541E-1

1,65786E-2

0.4

mean

3,02396E-2

1,19986E-2

1,32058E0

4,29030E-1

1,82055E-1

3,46186E-1

4,64459E-1

7,02858E-2

3,95318E-1

7,81840E0

1,08705E0

1,26541E-1

1,65786E-2

0.4

relative error(%)

0,00

0.6

BioUML

3,43689E-2

1,53019E-2

1,30869E0

3,01197E-1

1,70876E-1

3,19784E-1

4,76838E-1

6,57194E-2

3,92378E-1

7,41921E0

1,21405E0

1,57281E-1

2,07031E-2

0.6

ByoDyn

3,43689E-2

1,53019E-2

1,30869E0

3,01197E-1

1,70876E-1

3,19784E-1

4,76838E-1

6,57194E-2

3,92378E-1

7,41921E0

1,21405E0

1,57281E-1

2,07031E-2

0.6

MathSBML

3,43689E-2

1,53019E-2

1,30869E0

3,01197E-1

1,70876E-1

3,19784E-1

4,76838E-1

6,57194E-2

3,92378E-1

7,41921E0

1,21405E0

1,57281E-1

2,07031E-2

0.6

SBToolbox2

3,43785E-2

1,52959E-2

1,30874E0

3,00968E-1

1,71014E-1

3,19776E-1

4,76943E-1

6,57205E-2

3,92380E-1

7,41935E0

1,21442E0

1,57191E-1

2,06824E-2

0.6

SBWOdeSolver

3,43688E-2

1,53018E-2

1,30869E0

3,01200E-1

1,70875E-1

3,19784E-1

4,76839E-1

6,57195E-2

3,92378E-1

7,41921E0

1,21405E0

1,57280E-1

2,07031E-2

0.6

VCell

2,72721E-2

1,11209E-2

1,30861E0

5,28535E-1

1,26136E-1

3,17578E-1

4,74573E-1

6,55601E-2

3,92368E-1

7,41619E0

9,65295E-1

1,29385E-1

1,80393E-2

0.6

copasi

3,43689E-2

1,53019E-2

1,30869E0

3,01197E-1

1,70876E-1

3,19784E-1

4,76838E-1

6,57194E-2

3,92378E-1

7,41921E0

1,21405E0

1,57281E-1

2,07031E-2

0.6

edu.kgi.roadRunner

3,43689E-2

1,53019E-2

1,30869E0

3,01197E-1

1,70876E-1

3,19784E-1

4,76838E-1

6,57194E-2

3,92378E-1

7,41921E0

1,21405E0

1,57281E-1

2,07031E-2

0.6

min

2,72721E-2

1,11209E-2

1,30861E0

3,00968E-1

1,26136E-1

3,17578E-1

4,74573E-1

6,55601E-2

3,92368E-1

7,41619E0

9,65295E-1

1,29385E-1

1,80393E-2

0.6

max

3,43785E-2

1,53019E-2

1,30874E0

5,28535E-1

1,71014E-1

3,19784E-1

4,76943E-1

6,57205E-2

3,92380E-1

7,41935E0

1,21442E0

1,57281E-1

2,07031E-2

0.6

mean

3,43689E-2

1,53019E-2

1,30869E0

3,01197E-1

1,70876E-1

3,19784E-1

4,76838E-1

6,57194E-2

3,92378E-1

7,41921E0

1,21405E0

1,57281E-1

2,07031E-2

0.6

relative error(%)

0,00

0.8

BioUML

3,66560E-2

1,67154E-2

1,29550E0

2,09031E-1

1,44953E-1

2,95757E-1

4,95728E-1

6,13058E-2

3,89033E-1

7,05349E0

1,28005E0

1,84280E-1

2,53891E-2

0.8

ByoDyn

3,66560E-2

1,67154E-2

1,29550E0

2,09031E-1

1,44953E-1

2,95757E-1

4,95728E-1

6,13058E-2

3,89033E-1

7,05349E0

1,28005E0

1,84280E-1

2,53891E-2

0.8

MathSBML

3,66560E-2

1,67154E-2

1,29550E0

2,09031E-1

1,44953E-1

2,95757E-1

4,95728E-1

6,13058E-2

3,89033E-1

7,05349E0

1,28005E0

1,84280E-1

2,53891E-2

0.8

SBToolbox2

3,66686E-2

1,67204E-2

1,29546E0

2,08722E-1

1,45043E-1

2,95741E-1

4,95845E-1

6,13073E-2

3,89034E-1

7,05379E0

1,28043E0

1,84222E-1

2,53603E-2

0.8

SBWOdeSolver

3,66559E-2

1,67152E-2

1,29550E0

2,09033E-1

1,44953E-1

2,95757E-1

4,95728E-1

6,13058E-2

3,89033E-1

7,05350E0

1,28004E0

1,84279E-1

2,53891E-2

0.8

VCell

2,97111E-2

1,25868E-2

1,29535E0

4,59509E-1

1,18941E-1

2,93511E-1

4,90491E-1

6,10952E-2

3,89011E-1

7,04661E0

1,04384E0

1,48393E-1

2,12202E-2

0.8

copasi

3,66560E-2

1,67154E-2

1,29550E0

2,09031E-1

1,44953E-1

2,95757E-1

4,95728E-1

6,13058E-2

3,89033E-1

7,05349E0

1,28005E0

1,84280E-1

2,53891E-2

0.8

edu.kgi.roadRunner

3,66560E-2

1,67154E-2

1,29550E0

2,09031E-1

1,44953E-1

2,95757E-1

4,95728E-1

6,13058E-2

3,89033E-1

7,05349E0

1,28005E0

1,84280E-1

2,53891E-2

0.8

min

2,97111E-2

1,25868E-2

1,29535E0

2,08722E-1

1,18941E-1

2,93511E-1

4,90491E-1

6,10952E-2

3,89011E-1

7,04661E0

1,04384E0

1,48393E-1

2,12202E-2

0.8

max

3,66686E-2

1,67204E-2

1,29550E0

4,59509E-1

1,45043E-1

2,95757E-1

4,95845E-1

6,13073E-2

3,89034E-1

7,05379E0

1,28043E0

1,84280E-1

2,53891E-2

0.8

mean

3,66560E-2

1,67154E-2

1,29550E0

2,09031E-1

1,44953E-1

2,95757E-1

4,95728E-1

6,13058E-2

3,89033E-1

7,05349E0

1,28005E0

1,84280E-1

2,53891E-2

0.8

relative error(%)

0,00

1.0

BioUML

3,76250E-2

1,66568E-2

1,28107E0

1,43715E-1

1,17109E-1

2,74547E-1

5,18555E-1

5,70828E-2

3,85298E-1

6,72458E0

1,30338E0

2,05185E-1

2,98632E-2

1.0

ByoDyn

3,76250E-2

1,66568E-2

1,28107E0

1,43715E-1

1,17109E-1

2,74547E-1

5,18555E-1

5,70828E-2

3,85298E-1

6,72458E0

1,30338E0

2,05185E-1

2,98632E-2

1.0

MathSBML

3,76250E-2

1,66568E-2

1,28107E0

1,43715E-1

1,17109E-1

2,74547E-1

5,18555E-1

5,70828E-2

3,85298E-1

6,72458E0

1,30338E0

2,05185E-1

2,98632E-2

1.0

SBToolbox2

3,76416E-2

1,66739E-2

1,28108E0

1,43325E-1

1,17184E-1

2,74539E-1

5,18601E-1

5,70856E-2

3,85300E-1

6,72486E0

1,30396E0

2,05171E-1

2,98309E-2

1.0

SBWOdeSolver

3,76249E-2

1,66567E-2

1,28107E0

1,43718E-1

1,17110E-1

2,74547E-1

5,18555E-1

5,70828E-2

3,85298E-1

6,72459E0

1,30338E0

2,05184E-1

2,98631E-2

1.0

VCell

3,15065E-2

1,32236E-2

1,28085E0

4,03252E-1

1,07479E-1

2,72205E-1

5,10557E-1

5,68288E-2

3,85259E-1

6,71168E0

1,10062E0

1,65469E-1

2,45126E-2

1.0

copasi

3,76250E-2

1,66568E-2

1,28107E0

1,43715E-1

1,17109E-1

2,74547E-1

5,18555E-1

5,70828E-2

3,85298E-1

6,72458E0

1,30338E0

2,05185E-1

2,98632E-2

1.0

edu.kgi.roadRunner

3,76250E-2

1,66568E-2

1,28107E0

1,43715E-1

1,17109E-1

2,74547E-1

5,18555E-1

5,70828E-2

3,85298E-1

6,72458E0

1,30338E0

2,05185E-1

2,98632E-2

1.0

min

3,15065E-2

1,32236E-2

1,28085E0

1,43325E-1

1,07479E-1

2,72205E-1

5,10557E-1

5,68288E-2

3,85259E-1

6,71168E0

1,10062E0

1,65469E-1

2,45126E-2

1.0

max

3,76416E-2

1,66739E-2

1,28108E0

4,03252E-1

1,17184E-1

2,74547E-1

5,18601E-1

5,70856E-2

3,85300E-1

6,72486E0

1,30396E0

2,05185E-1

2,98632E-2

1.0

mean

3,76250E-2

1,66568E-2

1,28107E0

1,43715E-1

1,17109E-1

2,74547E-1

5,18555E-1

5,70828E-2

3,85298E-1

6,72458E0

1,30338E0

2,05185E-1

2,98632E-2

1.0

relative error(%)

0,00

1.2

BioUML

3,76671E-2

1,57041E-2

1,26552E0

9,80946E-2

9,26099E-2

2,56210E-1

5,42842E-1

5,31005E-2

3,81194E-1

6,43334E0

1,29731E0

2,19530E-1

3,36542E-2

1.2

ByoDyn

3,76671E-2

1,57041E-2

1,26552E0

9,80946E-2

9,26099E-2

2,56210E-1

5,42842E-1

5,31005E-2

3,81194E-1

6,43334E0

1,29731E0

2,19530E-1

3,36542E-2

1.2

MathSBML

3,76671E-2

1,57041E-2

1,26552E0

9,80946E-2

9,26099E-2

2,56210E-1

5,42842E-1

5,31005E-2

3,81194E-1

6,43334E0

1,29731E0

2,19530E-1

3,36542E-2

1.2

SBToolbox2

3,76809E-2

1,57203E-2

1,26550E0

9,77484E-2

9,26148E-2

2,56202E-1

5,42834E-1

5,31032E-2

3,81195E-1

6,43364E0

1,29780E0

2,19563E-1

3,36296E-2

1.2

SBWOdeSolver

3,76670E-2

1,57040E-2

1,26552E0

9,80964E-2

9,26106E-2

2,56211E-1

5,42842E-1

5,31005E-2

3,81194E-1

6,43335E0

1,29731E0

2,19529E-1

3,36541E-2

1.2

VCell

3,27747E-2

1,32461E-2

1,26519E0

3,57738E-1

9,52372E-2

2,53683E-1

5,32746E-1

5,28055E-2

3,81133E-1

6,41284E0

1,13982E0

1,79969E-1

2,76019E-2

1.2

copasi

3,76671E-2

1,57041E-2

1,26552E0

9,80946E-2

9,26099E-2

2,56210E-1

5,42842E-1

5,31005E-2

3,81194E-1

6,43334E0

1,29731E0

2,19530E-1

3,36542E-2

1.2

edu.kgi.roadRunner

3,76671E-2

1,57041E-2

1,26552E0

9,80946E-2

9,26099E-2

2,56210E-1

5,42842E-1

5,31005E-2

3,81194E-1

6,43334E0

1,29731E0

2,19530E-1

3,36542E-2

1.2

min

3,27747E-2

1,32461E-2

1,26519E0

9,77484E-2

9,26099E-2

2,53683E-1

5,32746E-1

5,28055E-2

3,81133E-1

6,41284E0

1,13982E0

1,79969E-1

2,76019E-2

1.2

max

3,76809E-2

1,57203E-2

1,26552E0

3,57738E-1

9,52372E-2

2,56211E-1

5,42842E-1

5,31032E-2

3,81195E-1

6,43364E0

1,29780E0

2,19563E-1

3,36542E-2

1.2

mean

3,76671E-2

1,57041E-2

1,26552E0

9,80946E-2

9,26099E-2

2,56210E-1

5,42842E-1

5,31005E-2

3,81194E-1

6,43334E0

1,29731E0

2,19530E-1

3,36542E-2

1.2

relative error(%)

0,00

1.4

BioUML

3,70688E-2

1,43337E-2

1,24894E0

6,65945E-2

7,29985E-2

2,40589E-1

5,66993E-1

4,94033E-2

3,76746E-1

6,17874E0

1,27134E0

2,27758E-1

3,65632E-2

1.4

ByoDyn

3,70688E-2

1,43337E-2

1,24894E0

6,65945E-2

7,29985E-2

2,40589E-1

5,66993E-1

4,94033E-2

3,76746E-1

6,17874E0

1,27134E0

2,27758E-1

3,65632E-2

1.4

MathSBML

3,70688E-2

1,43337E-2

1,24894E0

6,65945E-2

7,29985E-2

2,40589E-1

5,66993E-1

4,94033E-2

3,76746E-1

6,17874E0

1,27134E0

2,27758E-1

3,65632E-2

1.4

SBToolbox2

3,70819E-2

1,43482E-2

1,24893E0

6,62736E-2

7,29578E-2

2,40581E-1

5,66923E-1

4,94059E-2

3,76752E-1

6,17887E0

1,27174E0

2,27831E-1

3,65476E-2

1.4

SBWOdeSolver

3,70687E-2

1,43337E-2

1,24894E0

6,65960E-2

7,29992E-2

2,40590E-1

5,66993E-1

4,94034E-2

3,76746E-1

6,17875E0

1,27134E0

2,27757E-1

3,65630E-2

1.4

VCell

3,36118E-2

1,28798E-2

1,24851E0

3,21158E-1

8,39099E-2

2,37805E-1

5,55305E-1

4,90660E-2

3,76659E-1

6,14968E0

1,16479E0

1,91714E-1

3,03004E-2

1.4

copasi

3,70687E-2

1,43337E-2

1,24894E0

6,65945E-2

7,29984E-2

2,40589E-1

5,66993E-1

4,94033E-2

3,76746E-1

6,17874E0

1,27134E0

2,27758E-1

3,65632E-2

1.4

edu.kgi.roadRunner

3,70688E-2

1,43337E-2

1,24894E0

6,65945E-2

7,29985E-2

2,40589E-1

5,66993E-1

4,94033E-2

3,76746E-1

6,17874E0

1,27134E0

2,27758E-1

3,65632E-2

1.4

min

3,36118E-2

1,28798E-2

1,24851E0

6,62736E-2

7,29578E-2

2,37805E-1

5,55305E-1

4,90660E-2

3,76659E-1

6,14968E0

1,16479E0

1,91714E-1

3,03004E-2

1.4

max

3,70819E-2

1,43482E-2

1,24894E0

3,21158E-1

8,39099E-2

2,40590E-1

5,66993E-1

4,94059E-2

3,76752E-1

6,17887E0

1,27174E0

2,27831E-1

3,65632E-2

1.4

mean

3,70688E-2

1,43337E-2

1,24894E0

6,65945E-2

7,29985E-2

2,40589E-1

5,66993E-1

4,94033E-2

3,76746E-1

6,17874E0

1,27134E0

2,27758E-1

3,65632E-2

1.4

relative error(%)

0,00

1.6

BioUML

3,60370E-2

1,28658E-2

1,23146E0

4,50333E-2

5,81602E-2

2,27419E-1

5,90208E-1

4,60225E-2

3,71985E-1

5,95867E0

1,23216E0

2,30709E-1

3,85770E-2

1.6

ByoDyn

3,60370E-2

1,28658E-2

1,23146E0

4,50333E-2

5,81602E-2

2,27419E-1

5,90208E-1

4,60225E-2

3,71985E-1

5,95867E0

1,23216E0

2,30709E-1

3,85770E-2

1.6

MathSBML

3,60370E-2

1,28658E-2

1,23146E0

4,50333E-2

5,81602E-2

2,27419E-1

5,90208E-1

4,60225E-2

3,71985E-1

5,95867E0

1,23216E0

2,30709E-1

3,85770E-2

1.6

SBToolbox2

3,60474E-2

1,28745E-2

1,23144E0

4,47776E-2

5,80952E-2

2,27408E-1

5,90099E-1

4,60248E-2

3,71988E-1

5,95873E0

1,23245E0

2,30795E-1

3,85690E-2

1.6

SBWOdeSolver

3,60369E-2

1,28658E-2

1,23146E0

4,50344E-2

5,81608E-2

2,27419E-1

5,90207E-1

4,60226E-2

3,71985E-1

5,95867E0

1,23216E0

2,30708E-1

3,85768E-2

1.6

VCell

3,40966E-2

1,23068E-2

1,23091E0

2,91931E-1

7,41789E-2

2,24330E-1

5,77027E-1

4,56392E-2

3,71869E-1

5,92043E0

1,17825E0

2,00770E-1

3,25251E-2

1.6

copasi

3,60370E-2

1,28658E-2

1,23146E0

4,50333E-2

5,81601E-2

2,27419E-1

5,90208E-1

4,60225E-2

3,71985E-1

5,95867E0

1,23216E0

2,30709E-1

3,85770E-2

1.6

edu.kgi.roadRunner

3,60370E-2

1,28658E-2

1,23146E0

4,50333E-2

5,81602E-2

2,27419E-1

5,90208E-1

4,60225E-2

3,71985E-1

5,95867E0

1,23216E0

2,30709E-1

3,85770E-2

1.6

min

3,40966E-2

1,23068E-2

1,23091E0

4,47776E-2

5,80952E-2

2,24330E-1

5,77027E-1

4,56392E-2

3,71869E-1

5,92043E0

1,17825E0

2,00770E-1

3,25251E-2

1.6

max

3,60474E-2

1,28745E-2

1,23146E0

2,91931E-1

7,41789E-2

2,27419E-1

5,90208E-1

4,60248E-2

3,71988E-1

5,95873E0

1,23245E0

2,30795E-1

3,85770E-2

1.6

mean

3,60370E-2

1,28658E-2

1,23146E0

4,50333E-2

5,81602E-2

2,27419E-1

5,90208E-1

4,60225E-2

3,71985E-1

5,95867E0

1,23216E0

2,30709E-1

3,85770E-2

1.6

relative error(%)

0,00

1.8

BioUML

3,47191E-2

1,14845E-2

1,21320E0

3,03689E-2

4,73667E-2

2,16406E-1

6,12194E-1

4,29738E-2

3,66945E-1

5,77055E0

1,18447E0

2,29348E-1

3,97876E-2

1.8

ByoDyn

3,47191E-2

1,14845E-2

1,21320E0

3,03689E-2

4,73666E-2

2,16406E-1

6,12194E-1

4,29738E-2

3,66945E-1

5,77055E0

1,18447E0

2,29348E-1

3,97876E-2

1.8

MathSBML

3,47191E-2

1,14845E-2

1,21320E0

3,03689E-2

4,73667E-2

2,16406E-1

6,12194E-1

4,29738E-2

3,66945E-1

5,77055E0

1,18447E0

2,29348E-1

3,97876E-2

1.8

SBToolbox2

3,47270E-2

1,14879E-2

1,21326E0

3,01608E-2

4,72899E-2

2,16392E-1

6,12067E-1

4,29749E-2

3,66947E-1

5,77045E0

1,18475E0

2,29447E-1

3,97853E-2

1.8

SBWOdeSolver

3,47191E-2

1,14845E-2

1,21320E0

3,03697E-2

4,73672E-2

2,16407E-1

6,12194E-1

4,29738E-2

3,66945E-1

5,77056E0

1,18446E0

2,29348E-1

3,97875E-2

1.8

VCell

3,42941E-2

1,16558E-2

1,21253E0

2,68694E-1

6,61908E-2

2,12977E-1

5,97218E-1

4,25401E-2

3,66795E-1

5,72245E0

1,18239E0

2,07332E-1

3,42665E-2

1.8

copasi

3,47191E-2

1,14845E-2

1,21320E0

3,03689E-2

4,73666E-2

2,16406E-1

6,12194E-1

4,29738E-2

3,66945E-1

5,77055E0

1,18447E0

2,29348E-1

3,97876E-2

1.8

edu.kgi.roadRunner

3,47191E-2

1,14845E-2

1,21320E0

3,03689E-2

4,73667E-2

2,16406E-1

6,12194E-1

4,29738E-2

3,66945E-1

5,77055E0

1,18447E0

2,29348E-1

3,97876E-2

1.8

min

3,42941E-2

1,14845E-2

1,21253E0

3,01608E-2

4,72899E-2

2,12977E-1

5,97218E-1

4,25401E-2

3,66795E-1

5,72245E0

1,18239E0

2,07332E-1

3,42665E-2

1.8

max

3,47270E-2

1,16558E-2

1,21326E0

2,68694E-1

6,61908E-2

2,16407E-1

6,12194E-1

4,29749E-2

3,66947E-1

5,77056E0

1,18475E0

2,29447E-1

3,97876E-2

1.8

mean

3,47191E-2

1,14845E-2

1,21320E0

3,03689E-2

4,73667E-2

2,16406E-1

6,12194E-1

4,29738E-2

3,66945E-1

5,77055E0

1,18447E0

2,29348E-1

3,97876E-2

1.8

relative error(%)

0,00

2.0

BioUML

3,32194E-2

1,02777E-2

1,19430E0

2,04404E-2

3,97678E-2

2,07270E-1

6,32939E-1

4,02590E-2

3,61660E-1

5,61171E0

1,13151E0

2,24622E-1

4,03329E-2

2.0

ByoDyn

3,32194E-2

1,02777E-2

1,19430E0

2,04404E-2

3,97678E-2

2,07270E-1

6,32939E-1

4,02590E-2

3,61660E-1

5,61171E0

1,13151E0

2,24622E-1

4,03329E-2

2.0

MathSBML

3,32194E-2

1,02777E-2

1,19430E0

2,04404E-2

3,97678E-2

2,07270E-1

6,32939E-1

4,02590E-2

3,61660E-1

5,61171E0

1,13151E0

2,24622E-1

4,03329E-2

2.0

SBToolbox2

3,32256E-2

1,02772E-2

1,19430E0

2,02794E-2

3,96912E-2

2,07254E-1

6,32798E-1

4,02586E-2

3,61664E-1

5,61146E0

1,13166E0

2,24710E-1

4,03334E-2

2.0

SBWOdeSolver

3,32194E-2

1,02777E-2

1,19430E0

2,04410E-2

3,97683E-2

2,07270E-1

6,32939E-1

4,02591E-2

3,61660E-1

5,61171E0

1,13151E0

2,24622E-1

4,03328E-2

2.0

VCell

3,42579E-2

1,10083E-2

1,19348E0

2,50289E-1

5,98382E-2

2,03459E-1

6,15574E-1

3,97703E-2

3,61473E-1

5,55275E0

1,17900E0

2,11650E-1

3,55592E-2

2.0

copasi

3,32194E-2

1,02777E-2

1,19430E0

2,04403E-2

3,97678E-2

2,07270E-1

6,32939E-1

4,02590E-2

3,61660E-1

5,61171E0

1,13151E0

2,24622E-1

4,03329E-2

2.0

edu.kgi.roadRunner

3,32194E-2

1,02777E-2

1,19430E0

2,04404E-2

3,97678E-2

2,07270E-1

6,32939E-1

4,02590E-2

3,61660E-1

5,61171E0

1,13151E0

2,24622E-1

4,03329E-2

2.0

min

3,32194E-2

1,02772E-2

1,19348E0

2,02794E-2

3,96912E-2

2,03459E-1

6,15574E-1

3,97703E-2

3,61473E-1

5,55275E0

1,13151E0

2,11650E-1

3,55592E-2

2.0

max

3,42579E-2

1,10083E-2

1,19430E0

2,50289E-1

5,98382E-2

2,07270E-1

6,32939E-1

4,02591E-2

3,61664E-1

5,61171E0

1,17900E0

2,24710E-1

4,03334E-2

2.0

mean

3,32194E-2

1,02777E-2

1,19430E0

2,04404E-2

3,97678E-2

2,07270E-1

6,32939E-1

4,02590E-2

3,61660E-1

5,61171E0

1,13151E0

2,24622E-1

4,03329E-2

2.0

relative error(%)

0,00

2.2

BioUML

3,16116E-2

9,27301E-3

1,17488E0

1,37396E-2

3,45956E-2

1,99760E-1

6,52556E-1

3,78698E-2

3,56168E-1

5,47956E0

1,07557E0

2,17381E-1

4,03601E-2

2.2

ByoDyn

3,16116E-2

9,27301E-3

1,17488E0

1,37396E-2

3,45956E-2

1,99760E-1

6,52556E-1

3,78698E-2

3,56168E-1

5,47956E0

1,07557E0

2,17381E-1

4,03600E-2

2.2

MathSBML

3,16116E-2

9,27301E-3

1,17488E0

1,37396E-2

3,45956E-2

1,99760E-1

6,52556E-1

3,78698E-2

3,56168E-1

5,47956E0

1,07557E0

2,17381E-1

4,03600E-2

2.2

SBToolbox2

3,16153E-2

9,26981E-3

1,17492E0

1,36188E-2

3,45262E-2

1,99735E-1

6,52419E-1

3,78686E-2

3,56172E-1

5,47912E0

1,07572E0

2,17460E-1

4,03620E-2

2.2

SBWOdeSolver

3,16116E-2

9,27306E-3

1,17488E0

1,37401E-2

3,45960E-2

1,99760E-1

6,52556E-1

3,78699E-2

3,56168E-1

5,47956E0

1,07557E0

2,17381E-1

4,03600E-2

2.2

VCell

3,40313E-2

1,04104E-2

1,17389E0

2,35784E-1

5,49052E-2

1,95511E-1

6,32045E-1

3,73203E-2

3,55939E-1

5,40826E0

1,16950E0

2,13995E-1

3,64604E-2

2.2

copasi

3,16116E-2

9,27301E-3

1,17488E0

1,37396E-2

3,45956E-2

1,99760E-1

6,52556E-1

3,78698E-2

3,56168E-1

5,47956E0

1,07557E0

2,17381E-1

4,03601E-2

2.2

edu.kgi.roadRunner

3,16116E-2

9,27301E-3

1,17488E0

1,37396E-2

3,45956E-2

1,99760E-1

6,52556E-1

3,78698E-2

3,56168E-1

5,47956E0

1,07557E0

2,17381E-1

4,03601E-2

2.2

min

3,16116E-2

9,26981E-3

1,17389E0

1,36188E-2

3,45262E-2

1,95511E-1

6,32045E-1

3,73203E-2

3,55939E-1

5,40826E0

1,07557E0

2,13995E-1

3,64604E-2

2.2

max

3,40313E-2

1,04104E-2

1,17492E0

2,35784E-1

5,49052E-2

1,99760E-1

6,52556E-1

3,78699E-2

3,56172E-1

5,47956E0

1,16950E0

2,17460E-1

4,03620E-2

2.2

mean

3,16116E-2

9,27301E-3

1,17488E0

1,37396E-2

3,45956E-2

1,99760E-1

6,52556E-1

3,78698E-2

3,56168E-1

5,47956E0

1,07557E0

2,17381E-1

4,03600E-2

2.2

relative error(%)

0,00

2.4

BioUML

2,99477E-2

8,46505E-3

1,15504E0

9,22719E-3

3,12279E-2

1,93662E-1

6,71203E-1

3,57904E-2

3,50505E-1

5,37169E0

1,01821E0

2,08354E-1

4,00050E-2

2.4

ByoDyn

2,99477E-2

8,46505E-3

1,15504E0

9,22719E-3

3,12279E-2

1,93662E-1

6,71203E-1

3,57904E-2

3,50505E-1

5,37169E0

1,01821E0

2,08354E-1

4,00050E-2

2.4

MathSBML

2,99477E-2

8,46505E-3

1,15504E0

9,22719E-3

3,12279E-2

1,93662E-1

6,71203E-1

3,57904E-2

3,50505E-1

5,37169E0

1,01821E0

2,08354E-1

4,00050E-2

2.4

SBToolbox2

2,99502E-2

8,46014E-3

1,15504E0

9,13436E-3

3,11659E-2

1,93635E-1

6,71062E-1

3,57883E-2

3,50510E-1

5,37115E0

1,01830E0

2,08418E-1

4,00070E-2

2.4

SBWOdeSolver

2,99477E-2

8,46509E-3

1,15504E0

9,22752E-3

3,12282E-2

1,93662E-1

6,71203E-1

3,57904E-2

3,50505E-1

5,37169E0

1,01821E0

2,08354E-1

4,00050E-2

2.4

VCell

3,36511E-2

9,88425E-3

1,15387E0

2,24362E-1

5,11667E-2

1,88896E-1

6,46740E-1

3,51729E-2

3,50228E-1

5,28603E0

1,15512E0

2,14635E-1

3,70354E-2

2.4

copasi

2,99477E-2

8,46505E-3

1,15504E0

9,22719E-3

3,12279E-2

1,93662E-1

6,71203E-1

3,57904E-2

3,50505E-1

5,37169E0

1,01821E0

2,08354E-1

4,00050E-2

2.4

edu.kgi.roadRunner

2,99477E-2

8,46505E-3

1,15504E0

9,22719E-3

3,12279E-2

1,93662E-1

6,71203E-1

3,57904E-2

3,50505E-1

5,37169E0

1,01821E0

2,08354E-1

4,00050E-2

2.4

min

2,99477E-2

8,46014E-3

1,15387E0

9,13436E-3

3,11659E-2

1,88896E-1

6,46740E-1

3,51729E-2

3,50228E-1

5,28603E0

1,01821E0

2,08354E-1

3,70354E-2

2.4

max

3,36511E-2

9,88425E-3

1,15504E0

2,24362E-1

5,11667E-2

1,93662E-1

6,71203E-1

3,57904E-2

3,50510E-1

5,37169E0

1,15512E0

2,14635E-1

4,00070E-2

2.4

mean

2,99477E-2

8,46505E-3

1,15504E0

9,22719E-3

3,12279E-2

1,93662E-1

6,71203E-1

3,57904E-2

3,50505E-1

5,37169E0

1,01821E0

2,08354E-1

4,00050E-2

2.4

relative error(%)

0,00

2.6

BioUML

2,82647E-2

7,83275E-3

1,13490E0

6,19297E-3

2,91889E-2

1,88795E-1

6,89041E-1

3,40007E-2

3,44704E-1

5,28591E0

9,60550E-1

1,98139E-1

3,93844E-2

2.6

ByoDyn

2,82647E-2

7,83275E-3

1,13490E0

6,19298E-3

2,91889E-2

1,88795E-1

6,89041E-1

3,40007E-2

3,44704E-1

5,28591E0

9,60550E-1

1,98139E-1

3,93844E-2

2.6

MathSBML

2,82647E-2

7,83275E-3

1,13490E0

6,19297E-3

2,91889E-2

1,88795E-1

6,89041E-1

3,40007E-2

3,44704E-1

5,28591E0

9,60550E-1

1,98139E-1

3,93844E-2

2.6

SBToolbox2

2,82658E-2

7,82713E-3

1,13496E0

6,12568E-3

2,91375E-2

1,88765E-1

6,88904E-1

3,39976E-2

3,44708E-1

5,28529E0

9,60579E-1

1,98188E-1

3,93854E-2

2.6

SBWOdeSolver

2,82647E-2

7,83278E-3

1,13490E0

6,19321E-3

2,91891E-2

1,88795E-1

6,89041E-1

3,40008E-2

3,44704E-1

5,28591E0

9,60550E-1

1,98139E-1

3,93843E-2

2.6

VCell

3,31476E-2

9,43726E-3

1,13352E0

2,15384E-1

4,84037E-2

1,83410E-1

6,59854E-1

3,33057E-2

3,44374E-1

5,18334E0

1,13682E0

2,13829E-1

3,73491E-2

2.6

copasi

2,82647E-2

7,83275E-3

1,13490E0

6,19297E-3

2,91889E-2

1,88795E-1

6,89041E-1

3,40007E-2

3,44704E-1

5,28591E0

9,60550E-1

1,98139E-1

3,93844E-2

2.6

edu.kgi.roadRunner

2,82647E-2

7,83275E-3

1,13490E0

6,19297E-3

2,91889E-2

1,88795E-1

6,89041E-1

3,40007E-2

3,44704E-1

5,28591E0

9,60550E-1

1,98139E-1

3,93844E-2

2.6

min

2,82647E-2

7,82713E-3

1,13352E0

6,12568E-3

2,91375E-2

1,83410E-1

6,59854E-1

3,33057E-2

3,44374E-1

5,18334E0

9,60550E-1

1,98139E-1

3,73491E-2

2.6

max

3,31476E-2

9,43726E-3

1,13496E0

2,15384E-1

4,84037E-2

1,88795E-1

6,89041E-1

3,40008E-2

3,44708E-1

5,28591E0

1,13682E0

2,13829E-1

3,93854E-2

2.6

mean

2,82647E-2

7,83275E-3

1,13490E0

6,19297E-3

2,91889E-2

1,88795E-1

6,89041E-1

3,40007E-2

3,44704E-1

5,28591E0

9,60550E-1

1,98139E-1

3,93844E-2

2.6

relative error(%)

0,00

2.8

BioUML

2,65890E-2

7,34991E-3

1,11456E0

4,15479E-3

2,81272E-2

1,85009E-1

7,06216E-1

3,24787E-2

3,38798E-1

5,22022E0

9,03377E-1

1,87215E-1

3,85928E-2

2.8

ByoDyn

2,65890E-2

7,34991E-3

1,11456E0

4,15480E-3

2,81272E-2

1,85009E-1

7,06216E-1

3,24787E-2

3,38798E-1

5,22022E0

9,03377E-1

1,87215E-1

3,85928E-2

2.8

MathSBML

2,65890E-2

7,34991E-3

1,11456E0

4,15477E-3

2,81272E-2

1,85009E-1

7,06216E-1

3,24787E-2

3,38798E-1

5,22022E0

9,03377E-1

1,87215E-1

3,85928E-2

2.8

SBToolbox2

2,65895E-2

7,34405E-3

1,11458E0

4,10430E-3

2,80832E-2

1,84975E-1

7,06085E-1

3,24746E-2

3,38804E-1

5,21948E0

9,03385E-1

1,87254E-1

3,85920E-2

2.8

SBWOdeSolver

2,65890E-2

7,34994E-3

1,11456E0

4,15496E-3

2,81273E-2

1,85009E-1

7,06216E-1

3,24788E-2

3,38798E-1

5,22023E0

9,03377E-1

1,87215E-1

3,85927E-2

2.8

VCell

3,25451E-2

9,06771E-3

1,11295E0

2,08360E-1

4,64258E-2

1,78881E-1

6,71622E-1

3,16938E-2

3,38409E-1

5,09779E0

1,11538E0

2,11809E-1

3,74604E-2

2.8

copasi

2,65891E-2

7,34991E-3

1,11456E0

4,15479E-3

2,81272E-2

1,85009E-1

7,06216E-1

3,24787E-2

3,38798E-1

5,22022E0

9,03377E-1

1,87215E-1

3,85928E-2

2.8

edu.kgi.roadRunner

2,65890E-2

7,34991E-3

1,11456E0

4,15479E-3

2,81272E-2

1,85009E-1

7,06216E-1

3,24787E-2

3,38798E-1

5,22022E0

9,03377E-1

1,87215E-1

3,85928E-2

2.8

min

2,65890E-2

7,34405E-3

1,11295E0

4,10430E-3

2,80832E-2

1,78881E-1

6,71622E-1

3,16938E-2

3,38409E-1

5,09779E0

9,03377E-1

1,87215E-1

3,74604E-2

2.8

max

3,25451E-2

9,06771E-3

1,11458E0

2,08360E-1

4,64258E-2

1,85009E-1

7,06216E-1

3,24788E-2

3,38804E-1

5,22023E0

1,11538E0

2,11809E-1

3,85928E-2

2.8

mean

2,65890E-2

7,34991E-3

1,11456E0

4,15479E-3

2,81272E-2

1,85009E-1

7,06216E-1

3,24787E-2

3,38798E-1

5,22022E0

9,03377E-1

1,87215E-1

3,85928E-2

2.8

relative error(%)

0,00

3.0

BioUML

2,49398E-2

6,99081E-3

1,09411E0

2,78663E-3

2,77888E-2

1,82177E-1

7,22854E-1

3,12020E-2

3,32817E-1

5,17285E0

8,47256E-1

1,75953E-1

3,77045E-2

3.0

ByoDyn

2,49398E-2

6,99081E-3

1,09411E0

2,78663E-3

2,77887E-2

1,82177E-1

7,22854E-1

3,12020E-2

3,32817E-1

5,17285E0

8,47256E-1

1,75953E-1

3,77045E-2

3.0

MathSBML

2,49398E-2

Test: BIOMD0000000055.xml - Ok

Reaction graph

Plots

Comparison with other simulators