Test BIOMD0000000083.xml details

Test: BIOMD0000000083.xml - Ok

test	: BIOMD0000000083.xml
model	: xml, reaction graph
simulator engine	: DormandPrince
generated code	: BIOMD0000000083.java
results	: CSV file
plots	: plot
comparison	: comparison with other simulators
status	: Ok
simulation time	: 0 s.

Parameters:
ZERO 1.0E-100
ATOL 1.0E-15
RTOL 1.0E-12
STEP 0.01

Text color indicates difference between values:
- no significant difference ( < 0.1%)
- small relative error ( > 0.1% and <50%)
- simulation results significantly differ ( >50%)

Variables: parameter_0000097 species_10 species_11 species_14 species_15 species_12 species_13 species_9 species_18 species_16 species_7 species_8 species_17 species_5 species_6 species_3 parameter_0000096 species_4 species_2 species_1 species_0
Simulators: ByoDyn copasi edu.kgi.roadRunner VCell SBWOdeSolver MathSBML BioUML

time

result

parameter_0000097

species_10

species_11

species_14

species_15

species_12

species_13

species_9

species_18

species_16

species_7

species_8

species_17

species_5

species_6

species_3

parameter_0000096

species_4

species_2

species_1

species_0

0.0

BioUML

3,00000E0

0,00000E0

1,00000E0

0,00000E0

0.0

ByoDyn

2,40000E0

0,00000E0

0.0

MathSBML

0,00000E0

0.0

SBWOdeSolver

0,00000E0

0.0

VCell

0,00000E0

0.0

copasi

0,00000E0

0.0

edu.kgi.roadRunner

0,00000E0

0.0

min

2,40000E0

0,00000E0

0.0

max

2,40000E0

0,00000E0

0.0

mean

2,40000E0

0,00000E0

0.0

relative error(%)

25,0

0,00

100

0,00

0.2

BioUML

3,00000E0

3,18173E-20

8,42775E-22

7,38483E-24

1,23177E-27

2,94770E-22

2,03676E-5

1,93248E-10

1,50379E-11

2,50109E-8

4,33363E-8

1,16217E-9

8,27623E-10

3,35676E-8

6,91228E-11

4,50626E-4

1,00000E0

2,80560E-9

5,00822E-4

8,60154E-3

2,91484E-1

0.2

ByoDyn

2,40000E0

2,67007E-20

7,07268E-22

6,19734E-24

1,03370E-27

2,47375E-22

2,03676E-5

1,62172E-10

1,50379E-11

2,50109E-8

3,61476E-8

9,75036E-10

8,27623E-10

3,35676E-8

6,91228E-11

4,50626E-4

-1,91695E-10

2,80560E-9

5,00822E-4

8,60154E-3

2,91484E-1

0.2

MathSBML

3,19698E-20

8,55342E-22

7,41385E-24

1,24882E-27

2,99032E-22

2,03676E-5

1,93249E-10

1,50382E-11

2,50108E-8

4,33362E-8

1,16216E-9

8,27618E-10

3,35675E-8

6,91250E-11

4,50626E-4

2,80560E-9

5,00822E-4

8,60154E-3

2,91484E-1

0.2

SBWOdeSolver

3,20430E-20

8,50111E-22

7,47039E-24

1,24794E-27

2,97372E-22

2,03714E-5

1,93535E-10

1,50615E-11

2,50333E-8

4,33740E-8

1,16354E-9

8,28580E-10

3,35974E-8

6,92362E-11

4,50676E-4

2,80912E-9

5,00854E-4

8,60178E-3

2,91482E-1

0.2

VCell

2,86827E-20

7,59638E-22

6,65495E-24

1,11015E-27

2,65690E-22

2,03677E-5

1,74159E-10

1,50382E-11

2,50110E-8

3,88588E-8

1,04721E-9

8,27632E-10

3,35678E-8

6,91244E-11

4,50627E-4

2,80563E-9

5,00822E-4

8,60155E-3

2,91484E-1

0.2

copasi

3,19041E-20

8,50501E-22

7,40783E-24

1,24236E-27

2,97398E-22

2,03676E-5

1,93249E-10

1,50381E-11

2,50109E-8

4,33362E-8

1,16217E-9

8,27621E-10

3,35675E-8

6,91244E-11

4,50626E-4

2,80560E-9

5,00822E-4

8,60154E-3

2,91484E-1

0.2

edu.kgi.roadRunner

3,18173E-20

8,42775E-22

7,38483E-24

1,23177E-27

2,94770E-22

2,03676E-5

1,93248E-10

1,50379E-11

2,50109E-8

4,33363E-8

1,16217E-9

8,27623E-10

3,35676E-8

6,91228E-11

4,50626E-4

2,80560E-9

5,00822E-4

8,60154E-3

2,91484E-1

0.2

min

2,40000E0

2,67007E-20

7,07268E-22

6,19734E-24

1,03370E-27

2,47375E-22

2,03676E-5

1,62172E-10

1,50379E-11

2,50108E-8

3,61476E-8

9,75036E-10

8,27618E-10

3,35675E-8

6,91228E-11

4,50626E-4

-1,91695E-10

2,80560E-9

5,00822E-4

8,60154E-3

2,91482E-1

0.2

max

2,40000E0

3,20430E-20

8,55342E-22

7,47039E-24

1,24882E-27

2,99032E-22

2,03714E-5

1,93535E-10

1,50615E-11

2,50333E-8

4,33740E-8

1,16354E-9

8,28580E-10

3,35974E-8

6,92362E-11

4,50676E-4

-1,91695E-10

2,80912E-9

5,00854E-4

8,60178E-3

2,91484E-1

0.2

mean

2,40000E0

3,18607E-20

8,46443E-22

7,39633E-24

1,23706E-27

2,96071E-22

2,03676E-5

1,93249E-10

1,50381E-11

2,50109E-8

4,33362E-8

1,16217E-9

8,27623E-10

3,35676E-8

6,91244E-11

4,50626E-4

-1,91695E-10

2,80560E-9

5,00822E-4

8,60154E-3

2,91484E-1

0.2

relative error(%)

25,0

0,00

5,22E11

0,00

0.4

BioUML

3,00000E0

1,21631E-15

6,34011E-17

1,14199E-18

1,21132E-21

2,31620E-17

1,82201E-4

3,92089E-8

3,58908E-9

1,85023E-6

2,99280E-6

1,45945E-7

9,86202E-8

2,42916E-6

1,90329E-8

2,80804E-3

1,00000E0

4,18555E-7

2,23252E-3

2,76955E-2

5,19338E-1

0.4

ByoDyn

2,40000E0

1,01949E-15

5,31433E-17

9,57315E-19

1,01542E-21

1,94148E-17

1,82201E-4

3,28645E-8

3,58908E-9

1,85023E-6

2,50287E-6

1,22345E-7

9,86202E-8

2,42916E-6

1,90329E-8

2,80804E-3

-3,83333E-10

4,18555E-7

2,23252E-3

2,76955E-2

5,19338E-1

0.4

MathSBML

1,21683E-15

6,35045E-17

1,14409E-18

1,21509E-21

2,32002E-17

1,82201E-4

3,92088E-8

3,58907E-9

1,85023E-6

2,99280E-6

1,45945E-7

9,86201E-8

2,42916E-6

1,90329E-8

2,80804E-3

4,18554E-7

2,23252E-3

2,76955E-2

5,19338E-1

0.4

SBWOdeSolver

1,21950E-15

6,35924E-17

1,14597E-18

1,21711E-21

2,32328E-17

1,82213E-4

3,92304E-8

3,59125E-9

1,85088E-6

2,99381E-6

1,46011E-7

9,86635E-8

2,43001E-6

1,90454E-8

2,80816E-3

4,18768E-7

2,23255E-3

2,76958E-2

5,19337E-1

0.4

VCell

1,09548E-15

5,71223E-17

1,02924E-18

1,09180E-21

2,08688E-17

1,82202E-4

3,53087E-8

3,58925E-9

1,85025E-6

2,68639E-6

1,31368E-7

9,86226E-8

2,42919E-6

1,90340E-8

2,80804E-3

4,18569E-7

2,23252E-3

2,76955E-2

5,19338E-1

0.4

copasi

1,21757E-15

6,35971E-17

1,14559E-18

1,21775E-21

2,32338E-17

1,82201E-4

3,92089E-8

3,58909E-9

1,85022E-6

2,99280E-6

1,45945E-7

9,86200E-8

2,42916E-6

1,90331E-8

2,80804E-3

4,18556E-7

2,23252E-3

2,76955E-2

5,19338E-1

0.4

edu.kgi.roadRunner

1,21631E-15

6,34011E-17

1,14199E-18

1,21132E-21

2,31620E-17

1,82201E-4

3,92089E-8

3,58908E-9

1,85023E-6

2,99280E-6

1,45945E-7

9,86202E-8

2,42916E-6

1,90329E-8

2,80804E-3

4,18555E-7

2,23252E-3

2,76955E-2

5,19338E-1

0.4

min

2,40000E0

1,01949E-15

5,31433E-17

9,57315E-19

1,01542E-21

1,94148E-17

1,82201E-4

3,28645E-8

3,58907E-9

1,85022E-6

2,50287E-6

1,22345E-7

9,86200E-8

2,42916E-6

1,90329E-8

2,80804E-3

-3,83333E-10

4,18554E-7

2,23252E-3

2,76955E-2

5,19337E-1

0.4

max

2,40000E0

1,21950E-15

6,35971E-17

1,14597E-18

1,21775E-21

2,32338E-17

1,82213E-4

3,92304E-8

3,59125E-9

1,85088E-6

2,99381E-6

1,46011E-7

9,86635E-8

2,43001E-6

1,90454E-8

2,80816E-3

-3,83333E-10

4,18768E-7

2,23255E-3

2,76958E-2

5,19338E-1

0.4

mean

2,40000E0

1,21657E-15

6,34528E-17

1,14304E-18

1,21321E-21

2,31811E-17

1,82201E-4

3,92088E-8

3,58908E-9

1,85023E-6

2,99280E-6

1,45945E-7

9,86202E-8

2,42916E-6

1,90330E-8

2,80804E-3

-3,83333E-10

4,18555E-7

2,23252E-3

2,76955E-2

5,19338E-1

0.4

relative error(%)

25,0

0,00

2,61E11

0,00

0.6

BioUML

3,00000E0

3,94802E-13

3,01488E-14

8,31997E-16

2,44027E-18

1,15092E-14

5,70696E-4

6,64179E-7

6,94095E-8

1,93351E-5

2,94855E-5

1,98144E-6

1,28451E-6

2,48917E-5

4,14739E-7

7,61765E-3

1,00000E0

6,59016E-6

4,70665E-3

5,20835E-2

7,19049E-1

0.6

ByoDyn

2,40000E0

3,31344E-13

2,52959E-14

6,97865E-16

2,04690E-18

9,65625E-15

5,70696E-4

5,57430E-7

6,94095E-8

1,93351E-5

2,47120E-5

1,66339E-6

1,28451E-6

2,48917E-5

4,14739E-7

7,61765E-3

-5,74957E-10

6,59017E-6

4,70665E-3

5,20835E-2

7,19049E-1

0.6

MathSBML

3,94725E-13

3,01549E-14

8,32245E-16

2,44106E-18

1,15116E-14

5,70696E-4

6,64174E-7

6,94087E-8

1,93350E-5

2,94855E-5

1,98143E-6

1,28450E-6

2,48916E-5

4,14732E-7

7,61766E-3

6,59011E-6

4,70665E-3

5,20835E-2

7,19049E-1

0.6

SBWOdeSolver

3,95372E-13

3,01989E-14

8,33603E-16

2,44669E-18

1,15287E-14

5,70713E-4

6,64370E-7

6,94322E-8

1,93389E-5

2,94909E-5

1,98193E-6

1,28481E-6

2,48964E-5

4,14890E-7

7,61782E-3

6,59205E-6

4,70668E-3

5,20837E-2

7,19048E-1

0.6

VCell

3,55309E-13

2,71350E-14

7,48940E-16

2,19671E-18

1,03589E-14

5,70696E-4

5,97686E-7

6,94117E-8

1,93352E-5

2,64984E-5

1,78298E-6

1,28452E-6

2,48918E-5

4,14756E-7

7,61766E-3

6,59032E-6

4,70665E-3

5,20835E-2

7,19049E-1

0.6

copasi

3,94825E-13

3,01554E-14

8,32329E-16

2,44176E-18

1,15119E-14

5,70696E-4

6,64179E-7

6,94095E-8

1,93351E-5

2,94855E-5

1,98144E-6

1,28451E-6

2,48917E-5

4,14739E-7

7,61765E-3

6,59016E-6

4,70665E-3

5,20835E-2

7,19049E-1

0.6

edu.kgi.roadRunner

3,94802E-13

3,01488E-14

8,31997E-16

2,44027E-18

1,15092E-14

5,70696E-4

6,64179E-7

6,94095E-8

1,93351E-5

2,94855E-5

1,98144E-6

1,28451E-6

2,48917E-5

4,14739E-7

7,61765E-3

6,59016E-6

4,70665E-3

5,20835E-2

7,19049E-1

0.6

min

2,40000E0

3,31344E-13

2,52959E-14

6,97865E-16

2,04690E-18

9,65625E-15

5,70696E-4

5,57430E-7

6,94087E-8

1,93350E-5

2,47120E-5

1,66339E-6

1,28450E-6

2,48916E-5

4,14732E-7

7,61765E-3

-5,74957E-10

6,59011E-6

4,70665E-3

5,20835E-2

7,19048E-1

0.6

max

2,40000E0

3,95372E-13

3,01989E-14

8,33603E-16

2,44669E-18

1,15287E-14

5,70713E-4

6,64370E-7

6,94322E-8

1,93389E-5

2,94909E-5

1,98193E-6

1,28481E-6

2,48964E-5

4,14890E-7

7,61782E-3

-5,74957E-10

6,59205E-6

4,70668E-3

5,20837E-2

7,19049E-1

0.6

mean

2,40000E0

3,94763E-13

3,01519E-14

8,32121E-16

2,44066E-18

1,15104E-14

5,70696E-4

6,64176E-7

6,94095E-8

1,93351E-5

2,94855E-5

1,98144E-6

1,28451E-6

2,48917E-5

4,14739E-7

7,61765E-3

-5,74957E-10

6,59017E-6

4,70665E-3

5,20835E-2

7,19049E-1

0.6

relative error(%)

25,0

0,00

1,74E11

0,00

0.8

BioUML

3,00000E0

1,88733E-11

1,86815E-12

6,99056E-14

4,06288E-16

7,45051E-13

1,19525E-3

4,21585E-6

4,92140E-7

9,21765E-5

1,33696E-4

1,10728E-5

6,95462E-6

1,16630E-4

3,25648E-6

1,48263E-2

1,00000E0

4,19882E-5

7,53729E-3

7,93452E-2

9,01805E-1

0.8

ByoDyn

2,40000E0

1,58426E-11

1,56821E-12

5,86821E-14

3,41059E-16

6,25431E-13

1,19525E-3

3,53885E-6

4,92140E-7

9,21765E-5

1,12034E-4

9,29428E-6

6,95462E-6

1,16630E-4

3,25648E-6

1,48263E-2

-7,66553E-10

4,19882E-5

7,53729E-3

7,93452E-2

9,01805E-1

0.8

MathSBML

1,88685E-11

1,86813E-12

6,99041E-14

4,06216E-16

7,45042E-13

1,19525E-3

4,21584E-6

4,92136E-7

9,21764E-5

1,33696E-4

1,10728E-5

6,95461E-6

1,16630E-4

3,25643E-6

1,48263E-2

4,19879E-5

7,53729E-3

7,93452E-2

9,01805E-1

0.8

SBWOdeSolver

1,88906E-11

1,87012E-12

6,99923E-14

4,06974E-16

7,45862E-13

1,19527E-3

4,21659E-6

4,92240E-7

9,21878E-5

1,33711E-4

1,10744E-5

6,95562E-6

1,16644E-4

3,25723E-6

1,48265E-2

4,19959E-5

7,53731E-3

7,93453E-2

9,01804E-1

0.8

VCell

1,69867E-11

1,68144E-12

6,29221E-14

3,65709E-16

6,70595E-13

1,19525E-3

3,79428E-6

4,92147E-7

9,21768E-5

1,20059E-4

9,96527E-6

6,95466E-6

1,16630E-4

3,25654E-6

1,48263E-2

4,19887E-5

7,53729E-3

7,93452E-2

9,01805E-1

0.8

copasi

1,88743E-11

1,86840E-12

6,99204E-14

4,06426E-16

7,45162E-13

1,19525E-3

4,21585E-6

4,92140E-7

9,21765E-5

1,33696E-4

1,10728E-5

6,95462E-6

1,16630E-4

3,25648E-6

1,48263E-2

4,19882E-5

7,53729E-3

7,93452E-2

9,01805E-1

0.8

edu.kgi.roadRunner

1,88733E-11

1,86815E-12

6,99056E-14

4,06288E-16

7,45051E-13

1,19525E-3

4,21585E-6

4,92140E-7

9,21765E-5

1,33696E-4

1,10728E-5

6,95462E-6

1,16630E-4

3,25648E-6

1,48263E-2

4,19882E-5

7,53729E-3

7,93452E-2

9,01805E-1

0.8

min

2,40000E0

1,58426E-11

1,56821E-12

5,86821E-14

3,41059E-16

6,25431E-13

1,19525E-3

3,53885E-6

4,92136E-7

9,21764E-5

1,12034E-4

9,29428E-6

6,95461E-6

1,16630E-4

3,25643E-6

1,48263E-2

-7,66553E-10

4,19879E-5

7,53729E-3

7,93452E-2

9,01804E-1

0.8

max

2,40000E0

1,88906E-11

1,87012E-12

6,99923E-14

4,06974E-16

7,45862E-13

1,19527E-3

4,21659E-6

4,92240E-7

9,21878E-5

1,33711E-4

1,10744E-5

6,95562E-6

1,16644E-4

3,25723E-6

1,48265E-2

-7,66553E-10

4,19959E-5

7,53731E-3

7,93453E-2

9,01805E-1

0.8

mean

2,40000E0

1,88709E-11

1,86814E-12

6,99048E-14

4,06252E-16

7,45046E-13

1,19525E-3

4,21584E-6

4,92140E-7

9,21765E-5

1,33696E-4

1,10728E-5

6,95462E-6

1,16630E-4

3,25648E-6

1,48263E-2

-7,66553E-10

4,19882E-5

7,53729E-3

7,93452E-2

9,01805E-1

0.8

relative error(%)

25,0

0,00

1,30E11

0,00

1.0

BioUML

3,00000E0

3,22558E-10

3,86714E-11

1,83291E-12

1,76609E-14

1,61009E-11

2,03204E-3

1,59292E-5

2,04233E-6

2,88605E-4

4,01235E-4

3,85489E-5

2,36403E-5

3,59682E-4

1,47718E-5

2,41720E-2

1,00000E0

1,64449E-4

1,05211E-2

1,08237E-1

1,07287E0

1.0

ByoDyn

2,40000E0

2,70717E-10

3,24572E-11

1,53844E-12

1,48236E-14

1,35137E-11

2,03204E-3

1,33688E-5

2,04233E-6

2,88605E-4

3,36243E-4

3,23521E-5

2,36403E-5

3,59682E-4

1,47718E-5

2,41720E-2

-9,58149E-10

1,64449E-4

1,05211E-2

1,08237E-1

1,07287E0

1.0

MathSBML

3,22514E-10

3,86678E-11

1,83290E-12

1,76631E-14

1,60997E-11

2,03204E-3

1,59291E-5

2,04233E-6

2,88605E-4

4,01235E-4

3,85489E-5

2,36402E-5

3,59682E-4

1,47717E-5

2,41720E-2

1,64449E-4

1,05211E-2

1,08237E-1

1,07287E0

1.0

SBWOdeSolver

3,22763E-10

3,86996E-11

1,83449E-12

1,76816E-14

1,61131E-11

2,03206E-3

1,59310E-5

2,04261E-6

2,88629E-4

4,01265E-4

3,85528E-5

2,36425E-5

3,59710E-4

1,47742E-5

2,41722E-2

1,64470E-4

1,05211E-2

1,08237E-1

1,07287E0

1.0

VCell

2,89708E-10

3,47599E-11

1,64887E-12

1,58882E-14

1,44747E-11

2,03205E-3

1,43003E-5

2,04251E-6

2,88616E-4

3,59280E-4

3,45909E-5

2,36415E-5

3,59694E-4

1,47734E-5

2,41721E-2

1,64462E-4

1,05211E-2

1,08237E-1

1,07287E0

1.0

copasi

3,22568E-10

3,86750E-11

1,83325E-12

1,76659E-14

1,61027E-11

2,03204E-3

1,59292E-5

2,04233E-6

2,88605E-4

4,01235E-4

3,85489E-5

2,36403E-5

3,59682E-4

1,47718E-5

2,41720E-2

1,64449E-4

1,05211E-2

1,08237E-1

1,07287E0

1.0

edu.kgi.roadRunner

3,22558E-10

3,86714E-11

1,83291E-12

1,76609E-14

1,61009E-11

2,03204E-3

1,59292E-5

2,04233E-6

2,88605E-4

4,01235E-4

3,85489E-5

2,36403E-5

3,59682E-4

1,47718E-5

2,41720E-2

1,64449E-4

1,05211E-2

1,08237E-1

1,07287E0

1.0

min

2,40000E0

2,70717E-10

3,24572E-11

1,53844E-12

1,48236E-14

1,35137E-11

2,03204E-3

1,33688E-5

2,04233E-6

2,88605E-4

3,36243E-4

3,23521E-5

2,36402E-5

3,59682E-4

1,47717E-5

2,41720E-2

-9,58149E-10

1,64449E-4

1,05211E-2

1,08237E-1

1,07287E0

1.0

max

2,40000E0

3,22763E-10

3,86996E-11

1,83449E-12

1,76816E-14

1,61131E-11

2,03206E-3

1,59310E-5

2,04261E-6

2,88629E-4

4,01265E-4

3,85528E-5

2,36425E-5

3,59710E-4

1,47742E-5

2,41722E-2

-9,58149E-10

1,64470E-4

1,05211E-2

1,08237E-1

1,07287E0

1.0

mean

2,40000E0

3,22536E-10

3,86696E-11

1,83290E-12

1,76620E-14

1,61003E-11

2,03204E-3

1,59291E-5

2,04233E-6

2,88605E-4

4,01235E-4

3,85489E-5

2,36403E-5

3,59682E-4

1,47718E-5

2,41720E-2

-9,58149E-10

1,64449E-4

1,05211E-2

1,08237E-1

1,07287E0

1.0

relative error(%)

25,0

0,00

1,04E11

0,00

1.2

BioUML

3,00000E0

2,91736E-9

4,05688E-10

2,33041E-11

3,33484E-13

1,76130E-10

3,04721E-3

4,38845E-5

6,09552E-6

6,97252E-4

9,35454E-4

1,00387E-4

6,04571E-5

8,57635E-4

4,77069E-5

3,53458E-2

1,00000E0

4,76390E-4

1,35529E-2

1,38098E-1

1,23520E0

1.2

ByoDyn

2,40000E0

2,44819E-9

3,40458E-10

1,95578E-11

2,79874E-13

1,47812E-10

3,04721E-3

3,68259E-5

6,09552E-6

6,97252E-4

7,83881E-4

8,42385E-5

6,04571E-5

8,57635E-4

4,77069E-5

3,53458E-2

-1,14980E-9

4,76390E-4

1,35529E-2

1,38098E-1

1,23520E0

1.2

MathSBML

2,91741E-9

4,05724E-10

2,33089E-11

3,33581E-13

1,76150E-10

3,04721E-3

4,38846E-5

6,09553E-6

6,97252E-4

9,35454E-4

1,00387E-4

6,04571E-5

8,57635E-4

4,77069E-5

3,53458E-2

4,76390E-4

1,35529E-2

1,38098E-1

1,23520E0

1.2

SBWOdeSolver

2,91870E-9

4,05903E-10

2,33187E-11

3,33770E-13

1,76227E-10

3,04723E-3

4,38879E-5

6,09611E-6

6,97293E-4

9,35504E-4

1,00394E-4

6,04611E-5

8,57684E-4

4,77124E-5

3,53460E-2

4,76434E-4

1,35529E-2

1,38098E-1

1,23520E0

1.2

VCell

2,62514E-9

3,65465E-10

2,10287E-11

3,01122E-13

1,58730E-10

3,04740E-3

3,94039E-5

6,10081E-6

6,97535E-4

8,39865E-4

9,01573E-5

6,04893E-5

8,57956E-4

4,77575E-5

3,53477E-2

4,76782E-4

1,35529E-2

1,38099E-1

1,23519E0

1.2

copasi

2,91751E-9

4,05745E-10

2,33098E-11

3,33613E-13

1,76159E-10

3,04721E-3

4,38845E-5

6,09552E-6

6,97252E-4

9,35454E-4

1,00387E-4

6,04571E-5

8,57635E-4

4,77069E-5

3,53458E-2

4,76390E-4

1,35529E-2

1,38098E-1

1,23520E0

1.2

edu.kgi.roadRunner

2,91736E-9

4,05688E-10

2,33041E-11

3,33484E-13

1,76130E-10

3,04721E-3

4,38845E-5

6,09552E-6

6,97252E-4

9,35454E-4

1,00387E-4

6,04571E-5

8,57635E-4

4,77069E-5

3,53458E-2

4,76390E-4

1,35529E-2

1,38098E-1

1,23520E0

1.2

min

2,40000E0

2,44819E-9

3,40458E-10

1,95578E-11

2,79874E-13

1,47812E-10

3,04721E-3

3,68259E-5

6,09552E-6

6,97252E-4

7,83881E-4

8,42385E-5

6,04571E-5

8,57635E-4

4,77069E-5

3,53458E-2

-1,14980E-9

4,76390E-4

1,35529E-2

1,38098E-1

1,23519E0

1.2

max

2,40000E0

2,91870E-9

4,05903E-10

2,33187E-11

3,33770E-13

1,76227E-10

3,04740E-3

4,38879E-5

6,10081E-6

6,97535E-4

9,35504E-4

1,00394E-4

6,04893E-5

8,57956E-4

4,77575E-5

3,53477E-2

-1,14980E-9

4,76782E-4

1,35529E-2

1,38099E-1

1,23520E0

1.2

mean

2,40000E0

2,91738E-9

4,05706E-10

2,33065E-11

3,33532E-13

1,76140E-10

3,04721E-3

4,38845E-5

6,09552E-6

6,97252E-4

9,35454E-4

1,00387E-4

6,04571E-5

8,57635E-4

4,77069E-5

3,53458E-2

-1,14980E-9

4,76390E-4

1,35529E-2

1,38098E-1

1,23520E0

1.2

relative error(%)

25,0

0,00

8,70E10

0,00

1.4

BioUML

3,00000E0

1,71871E-8

2,69022E-9

1,81521E-10

3,58289E-12

1,21605E-9

4,20711E-3

9,80610E-5

1,45866E-5

1,41559E-3

1,84367E-3

2,15394E-4

1,27923E-4

1,72168E-3

1,22536E-4

4,80593E-2

1,00000E0

1,12588E-3

1,65779E-2

1,68571E-1

1,39069E0

1.4

ByoDyn

2,40000E0

1,44207E-8

2,25734E-9

1,52321E-10

3,00655E-12

1,02039E-9

4,20711E-3

8,22716E-5

1,45866E-5

1,41559E-3

1,54466E-3

1,80708E-4

1,27923E-4

1,72168E-3

1,22536E-4

4,80593E-2

-1,34145E-9

1,12588E-3

1,65779E-2

1,68571E-1

1,39069E0

1.4

MathSBML

1,71871E-8

2,69024E-9

1,81530E-10

3,58306E-12

1,21607E-9

4,20711E-3

9,80619E-5

1,45866E-5

1,41559E-3

1,84367E-3

2,15394E-4

1,27923E-4

1,72168E-3

1,22536E-4

4,80593E-2

1,12588E-3

1,65779E-2

1,68571E-1

1,39069E0

1.4

SBWOdeSolver

1,71931E-8

2,69129E-9

1,81607E-10

3,58521E-12

1,21655E-9

4,20712E-3

9,80666E-5

1,45876E-5

1,41565E-3

1,84374E-3

2,15405E-4

1,27929E-4

1,72175E-3

1,22546E-4

4,80595E-2

1,12596E-3

1,65779E-2

1,68571E-1

1,39069E0

1.4

VCell

1,54955E-8

2,42724E-9

1,64012E-10

3,23908E-12

1,09760E-9

4,20744E-3

8,82262E-5

1,46019E-5

1,41621E-3

1,65602E-3

1,93821E-4

1,27996E-4

1,72236E-3

1,22704E-4

4,80626E-2

1,12706E-3

1,65780E-2

1,68572E-1

1,39067E0

1.4

copasi

1,71873E-8

2,69030E-9

1,81535E-10

3,58329E-12

1,21610E-9

4,20711E-3

9,80610E-5

1,45866E-5

1,41559E-3

1,84367E-3

2,15394E-4

1,27923E-4

1,72168E-3

1,22536E-4

4,80593E-2

1,12588E-3

1,65779E-2

1,68571E-1

1,39069E0

1.4

edu.kgi.roadRunner

1,71871E-8

2,69022E-9

1,81521E-10

3,58289E-12

1,21605E-9

4,20711E-3

9,80610E-5

1,45866E-5

1,41559E-3

1,84367E-3

2,15394E-4

1,27923E-4

1,72168E-3

1,22536E-4

4,80593E-2

1,12588E-3

1,65779E-2

1,68571E-1

1,39069E0

1.4

min

2,40000E0

1,44207E-8

2,25734E-9

1,52321E-10

3,00655E-12

1,02039E-9

4,20711E-3

8,22716E-5

1,45866E-5

1,41559E-3

1,54466E-3

1,80708E-4

1,27923E-4

1,72168E-3

1,22536E-4

4,80593E-2

-1,34145E-9

1,12588E-3

1,65779E-2

1,68571E-1

1,39067E0

1.4

max

2,40000E0

1,71931E-8

2,69129E-9

1,81607E-10

3,58521E-12

1,21655E-9

4,20744E-3

9,80666E-5

1,46019E-5

1,41621E-3

1,84374E-3

2,15405E-4

1,27996E-4

1,72236E-3

1,22704E-4

4,80626E-2

-1,34145E-9

1,12706E-3

1,65780E-2

1,68572E-1

1,39069E0

1.4

mean

2,40000E0

1,71871E-8

2,69023E-9

1,81525E-10

3,58297E-12

1,21606E-9

4,20711E-3

9,80610E-5

1,45866E-5

1,41559E-3

1,84367E-3

2,15394E-4

1,27923E-4

1,72168E-3

1,22536E-4

4,80593E-2

-1,34145E-9

1,12588E-3

1,65779E-2

1,68571E-1

1,39069E0

1.4

relative error(%)

25,0

0,00

7,45E10

0,00

1.6

BioUML

3,00000E0

7,45913E-8

1,28559E-8

9,95138E-10

2,57042E-11

6,03949E-9

5,48219E-3

1,89195E-4

2,98423E-5

2,54028E-3

3,22844E-3

4,03153E-4

2,36823E-4

3,06006E-3

2,67273E-4

6,20680E-2

1,00000E0

2,30067E-3

1,95679E-2

1,99465E-1

1,54059E0

1.6

ByoDyn

2,40000E0

6,25687E-8

1,07849E-8

8,34915E-10

2,15657E-11

5,06672E-9

5,48219E-3

1,58677E-4

2,98423E-5

2,54028E-3

2,70377E-3

3,38113E-4

2,36823E-4

3,06006E-3

2,67274E-4

6,20680E-2

-1,53299E-9

2,30069E-3

1,95679E-2

1,99465E-1

1,54059E0

1.6

MathSBML

7,45914E-8

1,28559E-8

9,95153E-10

2,57047E-11

6,03953E-9

5,48219E-3

1,89195E-4

2,98423E-5

2,54028E-3

3,22844E-3

4,03153E-4

2,36823E-4

3,06006E-3

2,67273E-4

6,20680E-2

2,30067E-3

1,95679E-2

1,99465E-1

1,54059E0

1.6

SBWOdeSolver

7,46113E-8

1,28598E-8

9,95505E-10

2,57172E-11

6,04145E-9

5,48220E-3

1,89203E-4

2,98439E-5

2,54037E-3

3,22854E-3

4,03168E-4

2,36832E-4

3,06016E-3

2,67290E-4

6,20682E-2

2,30080E-3

1,95679E-2

1,99466E-1

1,54058E0

1.6

VCell

6,72856E-8

1,16073E-8

8,99770E-10

2,32519E-11

5,45526E-9

5,48259E-3

1,70298E-4

2,98710E-5

2,54127E-3

2,90020E-3

3,62869E-4

2,36941E-4

3,06112E-3

2,67630E-4

6,20721E-2

2,30299E-3

1,95679E-2

1,99465E-1

1,54056E0

1.6

copasi

7,45918E-8

1,28561E-8

9,95179E-10

2,57059E-11

6,03964E-9

5,48219E-3

1,89195E-4

2,98423E-5

2,54028E-3

3,22844E-3

4,03153E-4

2,36823E-4

3,06006E-3

2,67273E-4

6,20680E-2

2,30067E-3

1,95679E-2

1,99465E-1

1,54059E0

1.6

edu.kgi.roadRunner

7,45913E-8

1,28559E-8

9,95138E-10

2,57042E-11

6,03949E-9

5,48219E-3

1,89195E-4

2,98423E-5

2,54028E-3

3,22844E-3

4,03153E-4

2,36823E-4

3,06006E-3

2,67273E-4

6,20680E-2

2,30067E-3

1,95679E-2

1,99465E-1

1,54059E0

1.6

min

2,40000E0

6,25687E-8

1,07849E-8

8,34915E-10

2,15657E-11

5,06672E-9

5,48219E-3

1,58677E-4

2,98423E-5

2,54028E-3

2,70377E-3

3,38113E-4

2,36823E-4

3,06006E-3

2,67273E-4

6,20680E-2

-1,53299E-9

2,30067E-3

1,95679E-2

1,99465E-1

1,54056E0

1.6

max

2,40000E0

7,46113E-8

1,28598E-8

9,95505E-10

2,57172E-11

6,04145E-9

5,48259E-3

1,89203E-4

2,98710E-5

2,54127E-3

3,22854E-3

4,03168E-4

2,36941E-4

3,06112E-3

2,67630E-4

6,20721E-2

-1,53299E-9

2,30299E-3

1,95679E-2

1,99466E-1

1,54059E0

1.6

mean

2,40000E0

7,45913E-8

1,28559E-8

9,95145E-10

2,57045E-11

6,03951E-9

5,48219E-3

1,89195E-4

2,98423E-5

2,54028E-3

3,22844E-3

4,03153E-4

2,36823E-4

3,06006E-3

2,67274E-4

6,20680E-2

-1,53299E-9

2,30068E-3

1,95679E-2

1,99465E-1

1,54059E0

1.6

relative error(%)

25,0

0,00

6,52E10

0,00

1.8

BioUML

3,00000E0

2,57999E-7

4,81500E-8

4,19691E-9

1,36430E-10

2,34611E-8

6,84813E-3

3,27915E-4

5,43789E-5

4,16124E-3

5,18408E-3

6,82610E-4

3,97444E-4

4,97242E-3

5,16246E-4

7,71759E-2

1,00000E0

4,21885E-3

2,25088E-2

2,30680E-1

1,68580E0

1.8

ByoDyn

2,40000E0

2,16324E-7

4,03790E-8

3,52022E-9

1,14433E-10

1,96759E-8

6,84813E-3

2,74868E-4

5,43789E-5

4,16124E-3

4,33877E-3

5,72175E-4

3,97444E-4

4,97242E-3

5,16251E-4

7,71759E-2

-1,72464E-9

4,21890E-3

2,25088E-2

2,30680E-1

1,68580E0

1.8

MathSBML

2,58003E-7

4,81515E-8

4,19713E-9

1,36441E-10

2,34620E-8

6,84813E-3

3,27915E-4

5,43789E-5

4,16124E-3

5,18408E-3

6,82610E-4

3,97443E-4

4,97242E-3

5,16246E-4

7,71759E-2

4,21885E-3

2,25088E-2

2,30680E-1

1,68580E0

1.8

SBWOdeSolver

2,58053E-7

4,81616E-8

4,19813E-9

1,36485E-10

2,34672E-8

6,84814E-3

3,27926E-4

5,43810E-5

4,16135E-3

5,18420E-3

6,82630E-4

3,97455E-4

4,97254E-3

5,16273E-4

7,71761E-2

4,21903E-3

2,25088E-2

2,30680E-1

1,68580E0

1.8

VCell

2,32619E-7

4,34577E-8

3,79394E-9

1,23380E-10

2,11859E-8

6,84856E-3

2,95021E-4

5,44229E-5

4,16258E-3

Test: BIOMD0000000083.xml - Ok

Reaction graph

Plots

Comparison with other simulators