Test BIOMD0000000089.xml details

Test: BIOMD0000000089.xml - Ok

test	: BIOMD0000000089.xml
model	: xml, reaction graph
simulator engine	: DormandPrince
generated code	: BIOMD0000000089.java
results	: CSV file
plots	: plot
comparison	: comparison with other simulators
status	: Ok
simulation time	: 0 s.

Parameters:
ZERO 1.0E-100
ATOL 1.0E-15
RTOL 1.0E-12
STEP 0.01

Text color indicates difference between values:
- no significant difference ( < 0.1%)
- small relative error ( > 0.1% and <50%)
- simulation results significantly differ ( >50%)

Variables: cLc cYc cAn cXc cPn cAm cYm cTn cTm cXm cXn cAc cTc cLm cLn cYn
Simulators: ByoDyn copasi edu.kgi.roadRunner SBToolbox2 VCell SBWOdeSolver MathSBML BioUML

time

result

cLc

cYc

cAn

cXc

cPn

cAm

cYm

cTn

cTm

cXm

cXn

cAc

cTc

cLm

cLn

cYn

0.0

BioUML

1,32000E-2

4,10000E-3

8,64800E-1

1,54130E0

8,47600E-1

1,46921E1

3,03000E-2

5,40200E-1

4,30300E-1

9,57000E-2

4,58500E-1

7,02700E-1

1,02965E1

4,62500E-1

6,99000E-2

1,22000E-2

0.0

ByoDyn

1,32000E-2

4,10000E-3

8,64800E-1

1,54130E0

8,47600E-1

1,46921E1

3,03000E-2

5,40200E-1

4,30300E-1

9,57000E-2

4,58500E-1

7,02700E-1

1,02965E1

4,62500E-1

6,99000E-2

1,22000E-2

0.0

MathSBML

1,32000E-2

4,10000E-3

8,64800E-1

1,54130E0

8,47600E-1

1,46921E1

3,03000E-2

5,40200E-1

4,30300E-1

9,57000E-2

4,58500E-1

7,02700E-1

1,02965E1

4,62500E-1

6,99000E-2

1,22000E-2

0.0

SBToolbox2

1,32000E-2

4,10000E-3

8,64800E-1

1,54130E0

8,47600E-1

1,46920E1

3,03000E-2

5,40200E-1

4,30300E-1

9,57000E-2

4,58500E-1

7,02700E-1

1,02970E1

4,62500E-1

6,99000E-2

1,22000E-2

0.0

SBWOdeSolver

1,32000E-2

4,10000E-3

8,64800E-1

1,54130E0

8,47600E-1

1,46921E1

3,03000E-2

5,40200E-1

4,30300E-1

9,57000E-2

4,58500E-1

7,02700E-1

1,02965E1

4,62500E-1

6,99000E-2

1,22000E-2

0.0

VCell

1,32000E-2

4,10000E-3

8,64800E-1

1,54130E0

8,47600E-1

1,46921E1

3,03000E-2

5,40200E-1

4,30300E-1

9,57000E-2

4,58500E-1

7,02700E-1

1,02965E1

4,62500E-1

6,99000E-2

1,22000E-2

0.0

copasi

1,32000E-2

4,10000E-3

8,64800E-1

1,54130E0

8,47600E-1

1,46921E1

3,03000E-2

5,40200E-1

4,30300E-1

9,57000E-2

4,58500E-1

7,02700E-1

1,02965E1

4,62500E-1

6,99000E-2

1,22000E-2

0.0

edu.kgi.roadRunner

1,32000E-2

4,10000E-3

8,64800E-1

1,54130E0

8,47600E-1

1,46921E1

3,03000E-2

5,40200E-1

4,30300E-1

9,57000E-2

4,58500E-1

7,02700E-1

1,02965E1

4,62500E-1

6,99000E-2

1,22000E-2

0.0

min

1,32000E-2

4,10000E-3

8,64800E-1

1,54130E0

8,47600E-1

1,46920E1

3,03000E-2

5,40200E-1

4,30300E-1

9,57000E-2

4,58500E-1

7,02700E-1

1,02965E1

4,62500E-1

6,99000E-2

1,22000E-2

0.0

max

1,32000E-2

4,10000E-3

8,64800E-1

1,54130E0

8,47600E-1

1,46921E1

3,03000E-2

5,40200E-1

4,30300E-1

9,57000E-2

4,58500E-1

7,02700E-1

1,02970E1

4,62500E-1

6,99000E-2

1,22000E-2

0.0

mean

1,32000E-2

4,10000E-3

8,64800E-1

1,54130E0

8,47600E-1

1,46921E1

3,03000E-2

5,40200E-1

4,30300E-1

9,57000E-2

4,58500E-1

7,02700E-1

1,02965E1

4,62500E-1

6,99000E-2

1,22000E-2

0.0

relative error(%)

0,00

0.2

BioUML

2,27571E-2

7,48846E-3

8,61729E-1

1,53481E0

6,12503E-1

1,52078E1

1,63036E-1

4,97249E-1

4,37808E-1

9,09572E-2

4,57181E-1

7,61855E-1

9,76172E0

8,56059E-1

8,53922E-2

1,32297E-2

0.2

ByoDyn

2,27571E-2

7,48846E-3

8,61729E-1

1,53481E0

6,12503E-1

1,52078E1

1,63036E-1

4,97249E-1

4,37808E-1

9,09572E-2

4,57181E-1

7,61855E-1

9,76172E0

8,56059E-1

8,53922E-2

1,32297E-2

0.2

MathSBML

2,27571E-2

7,48846E-3

8,61729E-1

1,53481E0

6,12503E-1

1,52078E1

1,63036E-1

4,97249E-1

4,37808E-1

9,09572E-2

4,57181E-1

7,61855E-1

9,76172E0

8,56059E-1

8,53922E-2

1,32297E-2

0.2

SBToolbox2

2,27562E-2

7,48145E-3

8,61731E-1

1,53481E0

6,12485E-1

1,52075E1

1,63045E-1

4,97252E-1

4,37822E-1

9,09578E-2

4,57182E-1

7,61842E-1

9,76172E0

8,56091E-1

8,53670E-2

1,32302E-2

0.2

SBWOdeSolver

2,27570E-2

7,48849E-3

8,61729E-1

1,53481E0

6,12504E-1

1,52078E1

1,63034E-1

4,97249E-1

4,37808E-1

9,09572E-2

4,57181E-1

7,61855E-1

9,76172E0

8,56055E-1

8,53926E-2

1,32297E-2

0.2

VCell

2,27571E-2

7,48846E-3

8,61729E-1

1,53481E0

6,12503E-1

1,52078E1

1,63036E-1

4,97249E-1

4,37808E-1

9,09572E-2

4,57181E-1

7,61855E-1

9,76172E0

8,56059E-1

8,53922E-2

1,32297E-2

0.2

copasi

2,27571E-2

7,48846E-3

8,61729E-1

1,53481E0

6,12503E-1

1,52078E1

1,63036E-1

4,97249E-1

4,37808E-1

9,09572E-2

4,57181E-1

7,61855E-1

9,76172E0

8,56059E-1

8,53922E-2

1,32297E-2

0.2

edu.kgi.roadRunner

2,27571E-2

7,48846E-3

8,61729E-1

1,53481E0

6,12503E-1

1,52078E1

1,63036E-1

4,97249E-1

4,37808E-1

9,09572E-2

4,57181E-1

7,61855E-1

9,76172E0

8,56059E-1

8,53922E-2

1,32297E-2

0.2

min

2,27562E-2

7,48145E-3

8,61729E-1

1,53481E0

6,12485E-1

1,52075E1

1,63034E-1

4,97249E-1

4,37808E-1

9,09572E-2

4,57181E-1

7,61842E-1

9,76172E0

8,56055E-1

8,53670E-2

1,32297E-2

0.2

max

2,27571E-2

7,48849E-3

8,61731E-1

1,53481E0

6,12504E-1

1,52078E1

1,63045E-1

4,97252E-1

4,37822E-1

9,09578E-2

4,57182E-1

7,61855E-1

9,76172E0

8,56091E-1

8,53926E-2

1,32302E-2

0.2

mean

2,27571E-2

7,48846E-3

8,61729E-1

1,53481E0

6,12503E-1

1,52078E1

1,63036E-1

4,97249E-1

4,37808E-1

9,09572E-2

4,57181E-1

7,61855E-1

9,76172E0

8,56059E-1

8,53922E-2

1,32297E-2

0.2

relative error(%)

0,00

0.4

BioUML

3,06641E-2

1,26532E-2

8,62168E-1

1,52681E0

4,36109E-1

1,56073E1

1,96059E-1

4,56323E-1

4,47554E-1

8,61663E-2

4,55431E-1

8,37815E-1

9,25475E0

1,10996E0

1,18656E-1

1,61535E-2

0.4

ByoDyn

3,06641E-2

1,26532E-2

8,62168E-1

1,52681E0

4,36109E-1

1,56073E1

1,96059E-1

4,56323E-1

4,47554E-1

8,61663E-2

4,55431E-1

8,37815E-1

9,25475E0

1,10996E0

1,18656E-1

1,61535E-2

0.4

MathSBML

3,06641E-2

1,26532E-2

8,62168E-1

1,52681E0

4,36109E-1

1,56073E1

1,96059E-1

4,56323E-1

4,47554E-1

8,61663E-2

4,55431E-1

8,37815E-1

9,25475E0

1,10996E0

1,18656E-1

1,61535E-2

0.4

SBToolbox2

3,06673E-2

1,26407E-2

8,62166E-1

1,52682E0

4,36025E-1

1,56073E1

1,96103E-1

4,56319E-1

4,47605E-1

8,61676E-2

4,55434E-1

8,37777E-1

9,25479E0

1,11010E0

1,18597E-1

1,61474E-2

0.4

SBWOdeSolver

3,06639E-2

1,26531E-2

8,62169E-1

1,52681E0

4,36111E-1

1,56073E1

1,96057E-1

4,56324E-1

4,47554E-1

8,61663E-2

4,55431E-1

8,37815E-1

9,25475E0

1,10995E0

1,18656E-1

1,61535E-2

0.4

VCell

3,06641E-2

1,26532E-2

8,62168E-1

1,52681E0

4,36109E-1

1,56073E1

1,96059E-1

4,56323E-1

4,47554E-1

8,61663E-2

4,55431E-1

8,37815E-1

9,25475E0

1,10996E0

1,18656E-1

1,61535E-2

0.4

copasi

3,06641E-2

1,26532E-2

8,62168E-1

1,52681E0

4,36109E-1

1,56073E1

1,96059E-1

4,56323E-1

4,47554E-1

8,61663E-2

4,55431E-1

8,37815E-1

9,25475E0

1,10996E0

1,18656E-1

1,61535E-2

0.4

edu.kgi.roadRunner

3,06641E-2

1,26532E-2

8,62168E-1

1,52681E0

4,36109E-1

1,56073E1

1,96059E-1

4,56323E-1

4,47554E-1

8,61663E-2

4,55431E-1

8,37815E-1

9,25475E0

1,10996E0

1,18656E-1

1,61535E-2

0.4

min

3,06639E-2

1,26407E-2

8,62166E-1

1,52681E0

4,36025E-1

1,56073E1

1,96057E-1

4,56319E-1

4,47554E-1

8,61663E-2

4,55431E-1

8,37777E-1

9,25475E0

1,10995E0

1,18597E-1

1,61474E-2

0.4

max

3,06673E-2

1,26532E-2

8,62169E-1

1,52682E0

4,36111E-1

1,56073E1

1,96103E-1

4,56324E-1

4,47605E-1

8,61676E-2

4,55434E-1

8,37815E-1

9,25479E0

1,11010E0

1,18656E-1

1,61535E-2

0.4

mean

3,06641E-2

1,26532E-2

8,62168E-1

1,52681E0

4,36109E-1

1,56073E1

1,96059E-1

4,56323E-1

4,47554E-1

8,61663E-2

4,55431E-1

8,37815E-1

9,25475E0

1,10996E0

1,18656E-1

1,61535E-2

0.4

relative error(%)

0,00

0.6

BioUML

3,56521E-2

1,62197E-2

8,66624E-1

1,51731E0

3,06349E-1

1,59204E1

1,82268E-1

4,18577E-1

4,63591E-1

8,13318E-2

4,53242E-1

9,24169E-1

8,77893E0

1,26409E0

1,54948E-1

2,06602E-2

0.6

ByoDyn

3,56521E-2

1,62197E-2

8,66624E-1

1,51731E0

3,06349E-1

1,59204E1

1,82268E-1

4,18577E-1

4,63591E-1

8,13318E-2

4,53242E-1

9,24169E-1

8,77893E0

1,26409E0

1,54948E-1

2,06602E-2

0.6

MathSBML

3,56521E-2

1,62197E-2

8,66624E-1

1,51731E0

3,06349E-1

1,59204E1

1,82268E-1

4,18577E-1

4,63591E-1

8,13318E-2

4,53242E-1

9,24169E-1

8,77893E0

1,26409E0

1,54948E-1

2,06602E-2

0.6

SBToolbox2

3,56605E-2

1,62114E-2

8,66621E-1

1,51733E0

3,06143E-1

1,59212E1

1,82364E-1

4,18558E-1

4,63702E-1

8,13345E-2

4,53238E-1

9,24080E-1

8,77908E0

1,26445E0

1,54855E-1

2,06382E-2

0.6

SBWOdeSolver

3,56517E-2

1,62196E-2

8,66624E-1

1,51731E0

3,06351E-1

1,59204E1

1,82266E-1

4,18578E-1

4,63592E-1

8,13318E-2

4,53242E-1

9,24169E-1

8,77893E0

1,26409E0

1,54948E-1

2,06603E-2

0.6

VCell

3,56521E-2

1,62197E-2

8,66624E-1

1,51731E0

3,06349E-1

1,59204E1

1,82268E-1

4,18577E-1

4,63591E-1

8,13318E-2

4,53242E-1

9,24169E-1

8,77893E0

1,26409E0

1,54948E-1

2,06602E-2

0.6

copasi

3,56521E-2

1,62197E-2

8,66624E-1

1,51731E0

3,06349E-1

1,59204E1

1,82268E-1

4,18577E-1

4,63591E-1

8,13318E-2

4,53242E-1

9,24169E-1

8,77893E0

1,26409E0

1,54948E-1

2,06602E-2

0.6

edu.kgi.roadRunner

3,56521E-2

1,62197E-2

8,66624E-1

1,51731E0

3,06349E-1

1,59204E1

1,82268E-1

4,18577E-1

4,63591E-1

8,13318E-2

4,53242E-1

9,24169E-1

8,77893E0

1,26409E0

1,54948E-1

2,06602E-2

0.6

min

3,56517E-2

1,62114E-2

8,66621E-1

1,51731E0

3,06143E-1

1,59204E1

1,82266E-1

4,18558E-1

4,63591E-1

8,13318E-2

4,53238E-1

9,24080E-1

8,77893E0

1,26409E0

1,54855E-1

2,06382E-2

0.6

max

3,56605E-2

1,62197E-2

8,66624E-1

1,51733E0

3,06351E-1

1,59212E1

1,82364E-1

4,18578E-1

4,63702E-1

8,13345E-2

4,53242E-1

9,24169E-1

8,77908E0

1,26445E0

1,54948E-1

2,06603E-2

0.6

mean

3,56521E-2

1,62197E-2

8,66624E-1

1,51731E0

3,06349E-1

1,59204E1

1,82268E-1

4,18577E-1

4,63591E-1

8,13318E-2

4,53242E-1

9,24169E-1

8,77893E0

1,26409E0

1,54948E-1

2,06602E-2

0.6

relative error(%)

0,00

0.8

BioUML

3,84970E-2

1,76796E-2

8,75322E-1

1,50632E0

2,12711E-1

1,61697E1

1,52774E-1

3,84577E-1

4,85428E-1

7,65003E-2

4,50612E-1

1,01684E0

8,33923E0

1,34710E0

1,87136E-1

2,57521E-2

0.8

ByoDyn

3,84970E-2

1,76796E-2

8,75322E-1

1,50632E0

2,12711E-1

1,61697E1

1,52774E-1

3,84577E-1

4,85428E-1

7,65003E-2

4,50612E-1

1,01684E0

8,33923E0

1,34710E0

1,87136E-1

2,57521E-2

0.8

MathSBML

3,84970E-2

1,76796E-2

8,75322E-1

1,50632E0

2,12711E-1

1,61697E1

1,52774E-1

3,84577E-1

4,85428E-1

7,65003E-2

4,50612E-1

1,01684E0

8,33923E0

1,34710E0

1,87136E-1

2,57521E-2

0.8

SBToolbox2

3,85079E-2

1,76826E-2

8,75317E-1

1,50635E0

2,12418E-1

1,61701E1

1,52825E-1

3,84549E-1

4,85566E-1

7,65043E-2

4,50611E-1

1,01672E0

8,33949E0

1,34748E0

1,87063E-1

2,57207E-2

0.8

SBWOdeSolver

3,84970E-2

1,76794E-2

8,75323E-1

1,50632E0

2,12714E-1

1,61697E1

1,52773E-1

3,84577E-1

4,85429E-1

7,65003E-2

4,50612E-1

1,01684E0

8,33924E0

1,34710E0

1,87136E-1

2,57521E-2

0.8

VCell

3,84970E-2

1,76796E-2

8,75322E-1

1,50632E0

2,12711E-1

1,61697E1

1,52774E-1

3,84577E-1

4,85428E-1

7,65003E-2

4,50612E-1

1,01684E0

8,33923E0

1,34710E0

1,87136E-1

2,57521E-2

0.8

copasi

3,84970E-2

1,76796E-2

8,75322E-1

1,50632E0

2,12711E-1

1,61697E1

1,52774E-1

3,84577E-1

4,85428E-1

7,65003E-2

4,50612E-1

1,01684E0

8,33923E0

1,34710E0

1,87136E-1

2,57521E-2

0.8

edu.kgi.roadRunner

3,84970E-2

1,76796E-2

8,75322E-1

1,50632E0

2,12711E-1

1,61697E1

1,52774E-1

3,84577E-1

4,85428E-1

7,65003E-2

4,50612E-1

1,01684E0

8,33923E0

1,34710E0

1,87136E-1

2,57521E-2

0.8

min

3,84970E-2

1,76794E-2

8,75317E-1

1,50632E0

2,12418E-1

1,61697E1

1,52773E-1

3,84549E-1

4,85428E-1

7,65003E-2

4,50611E-1

1,01672E0

8,33923E0

1,34710E0

1,87063E-1

2,57207E-2

0.8

max

3,85079E-2

1,76826E-2

8,75323E-1

1,50635E0

2,12714E-1

1,61701E1

1,52825E-1

3,84577E-1

4,85566E-1

7,65043E-2

4,50612E-1

1,01684E0

8,33949E0

1,34748E0

1,87136E-1

2,57521E-2

0.8

mean

3,84970E-2

1,76796E-2

8,75322E-1

1,50632E0

2,12711E-1

1,61697E1

1,52774E-1

3,84577E-1

4,85428E-1

7,65003E-2

4,50612E-1

1,01684E0

8,33923E0

1,34710E0

1,87136E-1

2,57521E-2

0.8

relative error(%)

0,00

1.0

BioUML

3,97980E-2

1,75296E-2

8,88320E-1

1,49388E0

1,46303E-1

1,63724E1

1,21896E-1

3,54536E-1

5,10165E-1

7,17411E-2

4,47544E-1

1,11325E0

7,93868E0

1,38005E0

2,12459E-1

3,05784E-2

1.0

ByoDyn

3,97980E-2

1,75296E-2

8,88320E-1

1,49388E0

1,46303E-1

1,63724E1

1,21896E-1

3,54536E-1

5,10165E-1

7,17411E-2

4,47544E-1

1,11325E0

7,93868E0

1,38005E0

2,12459E-1

3,05784E-2

1.0

MathSBML

3,97980E-2

1,75296E-2

8,88320E-1

1,49388E0

1,46303E-1

1,63724E1

1,21896E-1

3,54536E-1

5,10165E-1

7,17411E-2

4,47544E-1

1,11325E0

7,93868E0

1,38005E0

2,12459E-1

3,05784E-2

1.0

SBToolbox2

3,98124E-2

1,75455E-2

8,88305E-1

1,49387E0

1,45929E-1

1,63731E1

1,21937E-1

3,54510E-1

5,10234E-1

7,17465E-2

4,47546E-1

1,11311E0

7,93901E0

1,38053E0

2,12421E-1

3,05424E-2

1.0

SBWOdeSolver

3,97979E-2

1,75295E-2

8,88320E-1

1,49388E0

1,46306E-1

1,63724E1

1,21896E-1

3,54536E-1

5,10165E-1

7,17411E-2

4,47544E-1

1,11325E0

7,93868E0

1,38005E0

2,12458E-1

3,05783E-2

1.0

VCell

3,97980E-2

1,75296E-2

8,88320E-1

1,49388E0

1,46303E-1

1,63724E1

1,21896E-1

3,54536E-1

5,10165E-1

7,17411E-2

4,47544E-1

1,11325E0

7,93868E0

1,38005E0

2,12459E-1

3,05784E-2

1.0

copasi

3,97980E-2

1,75296E-2

8,88320E-1

1,49388E0

1,46303E-1

1,63724E1

1,21896E-1

3,54536E-1

5,10165E-1

7,17411E-2

4,47544E-1

1,11325E0

7,93868E0

1,38005E0

2,12459E-1

3,05784E-2

1.0

edu.kgi.roadRunner

3,97980E-2

1,75296E-2

8,88320E-1

1,49388E0

1,46303E-1

1,63724E1

1,21896E-1

3,54536E-1

5,10165E-1

7,17411E-2

4,47544E-1

1,11325E0

7,93868E0

1,38005E0

2,12459E-1

3,05784E-2

1.0

min

3,97979E-2

1,75295E-2

8,88305E-1

1,49387E0

1,45929E-1

1,63724E1

1,21896E-1

3,54510E-1

5,10165E-1

7,17411E-2

4,47544E-1

1,11311E0

7,93868E0

1,38005E0

2,12421E-1

3,05424E-2

1.0

max

3,98124E-2

1,75455E-2

8,88320E-1

1,49388E0

1,46306E-1

1,63731E1

1,21937E-1

3,54536E-1

5,10234E-1

7,17465E-2

4,47546E-1

1,11325E0

7,93901E0

1,38053E0

2,12459E-1

3,05784E-2

1.0

mean

3,97980E-2

1,75296E-2

8,88320E-1

1,49388E0

1,46303E-1

1,63724E1

1,21896E-1

3,54536E-1

5,10165E-1

7,17411E-2

4,47544E-1

1,11325E0

7,93868E0

1,38005E0

2,12459E-1

3,05784E-2

1.0

relative error(%)

0,00

1.2

BioUML

4,00062E-2

1,64253E-2

9,05568E-1

1,48007E0

9,98908E-2

1,65415E1

9,51818E-2

3,28380E-1

5,35305E-1

6,71303E-2

4,44047E-1

1,21178E0

7,57766E0

1,37828E0

2,30296E-1

3,46331E-2

1.2

ByoDyn

4,00062E-2

1,64253E-2

9,05568E-1

1,48007E0

9,98908E-2

1,65415E1

9,51818E-2

3,28380E-1

5,35305E-1

6,71303E-2

4,44047E-1

1,21178E0

7,57766E0

1,37828E0

2,30296E-1

3,46331E-2

1.2

MathSBML

4,00062E-2

1,64253E-2

9,05568E-1

1,48007E0

9,98908E-2

1,65415E1

9,51818E-2

3,28380E-1

5,35305E-1

6,71303E-2

4,44047E-1

1,21178E0

7,57766E0

1,37828E0

2,30296E-1

3,46331E-2

1.2

SBToolbox2

4,00173E-2

1,64403E-2

9,05545E-1

1,48008E0

9,95490E-2

1,65420E1

9,51638E-2

3,28356E-1

5,35312E-1

6,71361E-2

4,44052E-1

1,21161E0

7,57795E0

1,37868E0

2,30314E-1

3,46044E-2

1.2

SBWOdeSolver

4,00061E-2

1,64252E-2

9,05569E-1

1,48007E0

9,98927E-2

1,65415E1

9,51827E-2

3,28381E-1

5,35304E-1

6,71303E-2

4,44047E-1

1,21178E0

7,57767E0

1,37828E0

2,30296E-1

3,46330E-2

1.2

VCell

4,00062E-2

1,64253E-2

9,05568E-1

1,48007E0

9,98908E-2

1,65415E1

9,51818E-2

3,28380E-1

5,35305E-1

6,71303E-2

4,44047E-1

1,21178E0

7,57766E0

1,37828E0

2,30296E-1

3,46331E-2

1.2

copasi

4,00062E-2

1,64253E-2

9,05568E-1

1,48007E0

9,98908E-2

1,65415E1

9,51819E-2

3,28380E-1

5,35305E-1

6,71303E-2

4,44047E-1

1,21178E0

7,57766E0

1,37828E0

2,30296E-1

3,46331E-2

1.2

edu.kgi.roadRunner

4,00062E-2

1,64253E-2

9,05568E-1

1,48007E0

9,98908E-2

1,65415E1

9,51818E-2

3,28380E-1

5,35305E-1

6,71303E-2

4,44047E-1

1,21178E0

7,57766E0

1,37828E0

2,30296E-1

3,46331E-2

1.2

min

4,00061E-2

1,64252E-2

9,05545E-1

1,48007E0

9,95490E-2

1,65415E1

9,51638E-2

3,28356E-1

5,35304E-1

6,71303E-2

4,44047E-1

1,21161E0

7,57766E0

1,37828E0

2,30296E-1

3,46044E-2

1.2

max

4,00173E-2

1,64403E-2

9,05569E-1

1,48008E0

9,98927E-2

1,65420E1

9,51827E-2

3,28381E-1

5,35312E-1

6,71361E-2

4,44052E-1

1,21178E0

7,57795E0

1,37868E0

2,30314E-1

3,46331E-2

1.2

mean

4,00062E-2

1,64253E-2

9,05568E-1

1,48007E0

9,98908E-2

1,65415E1

9,51818E-2

3,28380E-1

5,35305E-1

6,71303E-2

4,44047E-1

1,21178E0

7,57766E0

1,37828E0

2,30296E-1

3,46331E-2

1.2

relative error(%)

0,00

1.4

BioUML

3,94527E-2

1,48935E-2

9,26960E-1

1,46496E0

6,78288E-2

1,66862E1

7,40744E-2

3,05832E-1

5,59445E-1

6,27371E-2

4,40137E-1

1,31145E0

7,25478E0

1,35277E0

2,41071E-1

3,77126E-2

1.4

ByoDyn

3,94527E-2

1,48935E-2

9,26960E-1

1,46496E0

6,78288E-2

1,66862E1

7,40744E-2

3,05832E-1

5,59445E-1

6,27371E-2

4,40137E-1

1,31145E0

7,25478E0

1,35277E0

2,41071E-1

3,77126E-2

1.4

MathSBML

3,94527E-2

1,48935E-2

9,26960E-1

1,46496E0

6,78288E-2

1,66862E1

7,40744E-2

3,05832E-1

5,59445E-1

6,27371E-2

4,40137E-1

1,31145E0

7,25478E0

1,35277E0

2,41071E-1

3,77126E-2

1.4

SBToolbox2

3,94629E-2

1,49063E-2

9,26928E-1

1,46500E0

6,75108E-2

1,66870E1

7,40172E-2

3,05807E-1

5,59396E-1

6,27420E-2

4,40139E-1

1,31130E0

7,25494E0

1,35305E0

2,41125E-1

3,76928E-2

1.4

SBWOdeSolver

3,94527E-2

1,48934E-2

9,26960E-1

1,46496E0

6,78303E-2

1,66862E1

7,40753E-2

3,05832E-1

5,59444E-1

6,27371E-2

4,40137E-1

1,31145E0

7,25479E0

1,35277E0

2,41070E-1

3,77124E-2

1.4

VCell

3,94527E-2

1,48935E-2

9,26960E-1

1,46496E0

6,78288E-2

1,66862E1

7,40744E-2

3,05832E-1

5,59445E-1

6,27371E-2

4,40137E-1

1,31145E0

7,25478E0

1,35277E0

2,41071E-1

3,77126E-2

1.4

copasi

3,94527E-2

1,48935E-2

9,26960E-1

1,46496E0

6,78288E-2

1,66862E1

7,40744E-2

3,05832E-1

5,59445E-1

6,27371E-2

4,40137E-1

1,31145E0

7,25478E0

1,35277E0

2,41071E-1

3,77126E-2

1.4

edu.kgi.roadRunner

3,94527E-2

1,48935E-2

9,26960E-1

1,46496E0

6,78288E-2

1,66862E1

7,40744E-2

3,05832E-1

5,59445E-1

6,27371E-2

4,40137E-1

1,31145E0

7,25478E0

1,35277E0

2,41071E-1

3,77126E-2

1.4

min

3,94527E-2

1,48934E-2

9,26928E-1

1,46496E0

6,75108E-2

1,66862E1

7,40172E-2

3,05807E-1

5,59396E-1

6,27371E-2

4,40137E-1

1,31130E0

7,25478E0

1,35277E0

2,41070E-1

3,76928E-2

1.4

max

3,94629E-2

1,49063E-2

9,26960E-1

1,46500E0

6,78303E-2

1,66870E1

7,40753E-2

3,05832E-1

5,59445E-1

6,27420E-2

4,40139E-1

1,31145E0

7,25494E0

1,35305E0

2,41125E-1

3,77126E-2

1.4

mean

3,94527E-2

1,48935E-2

9,26960E-1

1,46496E0

6,78288E-2

1,66862E1

7,40744E-2

3,05832E-1

5,59445E-1

6,27371E-2

4,40137E-1

1,31145E0

7,25478E0

1,35277E0

2,41071E-1

3,77126E-2

1.4

relative error(%)

0,00

1.6

BioUML

3,83748E-2

1,32797E-2

9,52352E-1

1,44866E0

4,58751E-2

1,68132E1

5,82733E-2

2,86507E-1

5,82043E-1

5,86158E-2

4,35839E-1

1,41169E0

6,96773E0

1,31120E0

2,45670E-1

3,98150E-2

1.6

ByoDyn

3,83748E-2

1,32797E-2

9,52352E-1

1,44866E0

4,58751E-2

1,68132E1

5,82733E-2

2,86507E-1

5,82043E-1

5,86158E-2

4,35839E-1

1,41169E0

6,96773E0

1,31120E0

2,45670E-1

3,98150E-2

1.6

MathSBML

3,83748E-2

1,32797E-2

9,52352E-1

1,44866E0

4,58751E-2

1,68132E1

5,82733E-2

2,86507E-1

5,82042E-1

5,86158E-2

4,35839E-1

1,41169E0

6,96773E0

1,31120E0

2,45670E-1

3,98150E-2

1.6

SBToolbox2

3,83812E-2

1,32868E-2

9,52312E-1

1,44864E0

4,56200E-2

1,68130E1

5,81973E-2

2,86484E-1

5,81966E-1

5,86198E-2

4,35845E-1

1,41158E0

6,96778E0

1,31138E0

2,45734E-1

3,98027E-2

1.6

SBWOdeSolver

3,83747E-2

1,32797E-2

9,52353E-1

1,44866E0

4,58762E-2

1,68132E1

5,82742E-2

2,86508E-1

5,82042E-1

5,86159E-2

4,35838E-1

1,41169E0

6,96774E0

1,31119E0

2,45670E-1

3,98149E-2

1.6

VCell

3,83748E-2

1,32797E-2

9,52352E-1

1,44866E0

4,58751E-2

1,68132E1

5,82733E-2

2,86507E-1

5,82043E-1

5,86158E-2

4,35839E-1

1,41169E0

6,96773E0

1,31120E0

2,45670E-1

3,98150E-2

1.6

copasi

3,83748E-2

1,32797E-2

9,52352E-1

1,44866E0

4,58751E-2

1,68132E1

5,82733E-2

2,86507E-1

5,82043E-1

5,86158E-2

4,35839E-1

1,41169E0

6,96773E0

1,31120E0

2,45670E-1

3,98150E-2

1.6

edu.kgi.roadRunner

3,83748E-2

1,32797E-2

9,52352E-1

1,44866E0

4,58751E-2

1,68132E1

5,82733E-2

2,86507E-1

5,82043E-1

5,86158E-2

4,35839E-1

1,41169E0

6,96773E0

1,31120E0

2,45670E-1

3,98150E-2

1.6

min

3,83747E-2

1,32797E-2

9,52312E-1

1,44864E0

4,56200E-2

1,68130E1

5,81973E-2

2,86484E-1

5,81966E-1

5,86158E-2

4,35838E-1

1,41158E0

6,96773E0

1,31119E0

2,45670E-1

3,98027E-2

1.6

max

3,83812E-2

1,32868E-2

9,52353E-1

1,44866E0

4,58762E-2

1,68132E1

5,82742E-2

2,86508E-1

5,82043E-1

5,86198E-2

4,35845E-1

1,41169E0

6,96778E0

1,31138E0

2,45734E-1

3,98150E-2

1.6

mean

3,83748E-2

1,32797E-2

9,52352E-1

1,44866E0

4,58751E-2

1,68132E1

5,82733E-2

2,86507E-1

5,82043E-1

5,86158E-2

4,35839E-1

1,41169E0

6,96773E0

1,31120E0

2,45670E-1

3,98150E-2

1.6

relative error(%)

0,00

1.8

BioUML

3,69396E-2

1,17776E-2

9,81589E-1

1,43129E0

3,09399E-2

1,69272E1

4,68810E-2

2,69999E-1

6,03058E-1

5,48028E-2

4,31179E-1

1,51218E0

6,71394E0

1,25885E0

2,45142E-1

4,10495E-2

1.8

ByoDyn

3,69396E-2

1,17776E-2

9,81589E-1

1,43129E0

3,09399E-2

1,69272E1

4,68810E-2

2,69999E-1

6,03058E-1

5,48028E-2

4,31179E-1

1,51218E0

6,71394E0

1,25885E0

2,45142E-1

4,10495E-2

1.8

MathSBML

3,69396E-2

1,17776E-2

9,81589E-1

1,43129E0

3,09399E-2

1,69272E1

4,68810E-2

2,69999E-1

6,03058E-1

5,48028E-2

4,31179E-1

1,51218E0

6,71394E0

1,25885E0

2,45142E-1

4,10495E-2

1.8

SBToolbox2

3,69440E-2

1,17798E-2

9,81549E-1

1,43126E0

3,07336E-2

1,69271E1

4,67980E-2

2,69977E-1

6,02958E-1

5,48059E-2

4,31183E-1

1,51208E0

6,71384E0

1,25900E0

2,45215E-1

4,10433E-2

1.8

SBWOdeSolver

3,69395E-2

1,17777E-2

9,81590E-1

1,43129E0

3,09408E-2

1,69272E1

4,68817E-2

2,70000E-1

6,03058E-1

5,48029E-2

4,31179E-1

1,51218E0

6,71394E0

1,25885E0

2,45141E-1

4,10494E-2

1.8

VCell

3,69396E-2

1,17776E-2

9,81589E-1

1,43129E0

3,09399E-2

1,69272E1

4,68810E-2

2,69999E-1

6,03058E-1

5,48028E-2

4,31179E-1

1,51218E0

6,71394E0

1,25885E0

2,45142E-1

4,10495E-2

1.8

copasi

3,69396E-2

1,17776E-2

9,81589E-1

1,43129E0

3,09399E-2

1,69272E1

4,68810E-2

2,69999E-1

6,03058E-1

5,48028E-2

4,31179E-1

1,51218E0

6,71394E0

1,25885E0

2,45142E-1

4,10495E-2

1.8

edu.kgi.roadRunner

3,69396E-2

1,17776E-2

9,81589E-1

1,43129E0

3,09399E-2

1,69272E1

4,68810E-2

2,69999E-1

6,03058E-1

5,48028E-2

4,31179E-1

1,51218E0

6,71394E0

1,25885E0

2,45142E-1

4,10495E-2

1.8

min

3,69395E-2

1,17776E-2

9,81549E-1

1,43126E0

3,07336E-2

1,69271E1

4,67980E-2

2,69977E-1

6,02958E-1

5,48028E-2

4,31179E-1

1,51208E0

6,71384E0

1,25885E0

2,45141E-1

4,10433E-2

1.8

max

3,69440E-2

1,17798E-2

9,81590E-1

1,43129E0

3,09408E-2

1,69272E1

4,68817E-2

2,70000E-1

6,03058E-1

5,48059E-2

4,31183E-1

1,51218E0

6,71394E0

1,25900E0

2,45215E-1

4,10495E-2

1.8

mean

3,69396E-2

1,17776E-2

9,81589E-1

1,43129E0

3,09399E-2

1,69272E1

4,68810E-2

2,69999E-1

6,03058E-1

5,48028E-2

4,31179E-1

1,51218E0

6,71394E0

1,25885E0

2,45142E-1

4,10495E-2

1.8

relative error(%)

0,00

2.0

BioUML

3,52634E-2

1,04758E-2

1,01451E0

1,41298E0

2,08263E-2

1,70313E1

3,89205E-2

2,55929E-1

6,22696E-1

5,13172E-2

4,26191E-1

1,61277E0

6,49086E0

1,19937E0

2,40520E-1

4,15713E-2

2.0

ByoDyn

3,52634E-2

1,04758E-2

1,01451E0

1,41298E0

2,08263E-2

1,70313E1

3,89205E-2

2,55929E-1

6,22696E-1

5,13172E-2

4,26191E-1

1,61277E0

6,49086E0

1,19937E0

2,40520E-1

4,15713E-2

2.0

MathSBML

3,52634E-2

1,04758E-2

1,01451E0

1,41298E0

2,08263E-2

1,70313E1

3,89205E-2

2,55929E-1

6,22696E-1

5,13172E-2

4,26191E-1

1,61277E0

6,49086E0

1,19937E0

2,40520E-1

4,15713E-2

2.0

SBToolbox2

3,52656E-2

1,04740E-2

1,01446E0

1,41300E0

2,06648E-2

1,70318E1

3,88408E-2

2,55902E-1

6,22588E-1

5,13184E-2

4,26192E-1

1,61268E0

6,49060E0

1,19942E0

2,40584E-1

4,15686E-2

2.0

SBWOdeSolver

3,52634E-2

1,04758E-2

1,01451E0

1,41298E0

2,08269E-2

1,70313E1

3,89211E-2

2,55929E-1

6,22696E-1

5,13172E-2

4,26190E-1

1,61277E0

6,49086E0

1,19937E0

2,40520E-1

4,15712E-2

2.0

VCell

3,52634E-2

1,04758E-2

1,01451E0

1,41298E0

2,08263E-2

1,70313E1

3,89205E-2

2,55929E-1

6,22696E-1

5,13172E-2

4,26191E-1

1,61277E0

6,49086E0

1,19937E0

2,40520E-1

4,15713E-2

2.0

copasi

3,52634E-2

1,04758E-2

1,01451E0

1,41298E0

2,08263E-2

1,70313E1

3,89205E-2

2,55929E-1

6,22696E-1

5,13172E-2

4,26191E-1

1,61277E0

6,49086E0

1,19937E0

2,40520E-1

4,15713E-2

2.0

edu.kgi.roadRunner

3,52634E-2

1,04758E-2

1,01451E0

1,41298E0

2,08263E-2

1,70313E1

3,89205E-2

2,55929E-1

6,22696E-1

5,13172E-2

4,26191E-1

1,61277E0

6,49086E0

1,19937E0

2,40520E-1

4,15713E-2

2.0

min

3,52634E-2

1,04740E-2

1,01446E0

1,41298E0

2,06648E-2

1,70313E1

3,88408E-2

2,55902E-1

6,22588E-1

5,13172E-2

4,26190E-1

1,61268E0

6,49060E0

1,19937E0

2,40520E-1

4,15686E-2

2.0

max

3,52656E-2

1,04758E-2

1,01451E0

1,41300E0

2,08269E-2

1,70318E1

3,89211E-2

2,55929E-1

6,22696E-1

5,13184E-2

4,26192E-1

1,61277E0

6,49086E0

1,19942E0

2,40584E-1

4,15713E-2

2.0

mean

3,52634E-2

1,04758E-2

1,01451E0

1,41298E0

2,08263E-2

1,70313E1

3,89205E-2

2,55929E-1

6,22696E-1

5,13172E-2

4,26191E-1

1,61277E0

6,49086E0

1,19937E0

2,40520E-1

4,15713E-2

2.0

relative error(%)

0,00

2.2

BioUML

3,34277E-2

9,39863E-3

1,05096E0

1,39386E0

1,39998E-2

1,71279E1

3,35382E-2

2,43966E-1

6,41250E-1

4,81641E-2

4,20909E-1

1,71341E0

6,29615E0

1,13524E0

2,32747E-1

4,15423E-2

2.2

ByoDyn

3,34277E-2

9,39863E-3

1,05096E0

1,39386E0

1,39998E-2

1,71279E1

3,35382E-2

2,43966E-1

6,41250E-1

4,81641E-2

4,20909E-1

1,71341E0

6,29615E0

1,13524E0

2,32747E-1

4,15423E-2

2.2

MathSBML

3,34277E-2

9,39863E-3

1,05096E0

1,39386E0

1,39998E-2

1,71279E1

3,35382E-2

2,43966E-1

6,41250E-1

4,81641E-2

4,20909E-1

1,71341E0

6,29615E0

1,13524E0

2,32747E-1

4,15423E-2

2.2

SBToolbox2

3,34279E-2

9,39439E-3

1,05088E0

1,39390E0

1,38782E-2

1,71279E1

3,34680E-2

2,43941E-1

6,41140E-1

4,81640E-2

4,20919E-1

1,71330E0

6,29580E0

1,13523E0

2,32799E-1

4,15399E-2

2.2

SBWOdeSolver

3,34277E-2

9,39869E-3

1,05096E0

1,39386E0

1,40002E-2

1,71279E1

3,35386E-2

2,43966E-1

6,41250E-1

4,81642E-2

4,20909E-1

1,71341E0

6,29616E0

1,13524E0

2,32747E-1

4,15422E-2

2.2

VCell

3,34277E-2

9,39863E-3

1,05096E0

1,39386E0

1,39998E-2

1,71279E1

3,35382E-2

2,43966E-1

6,41250E-1

4,81641E-2

4,20909E-1

1,71341E0

6,29615E0

1,13524E0

2,32747E-1

4,15423E-2

2.2

copasi

3,34277E-2

9,39863E-3

1,05096E0

1,39386E0

1,39997E-2

1,71279E1

3,35382E-2

2,43966E-1

6,41250E-1

4,81641E-2

4,20909E-1

1,71341E0

6,29615E0

1,13524E0

2,32747E-1

4,15423E-2

2.2

edu.kgi.roadRunner

3,34277E-2

9,39863E-3

1,05096E0

1,39386E0

1,39998E-2

1,71279E1

3,35382E-2

2,43966E-1

6,41250E-1

4,81641E-2

4,20909E-1

1,71341E0

6,29615E0

1,13524E0

2,32747E-1

4,15423E-2

2.2

min

3,34277E-2

9,39439E-3

1,05088E0

1,39386E0

1,38782E-2

1,71279E1

3,34680E-2

2,43941E-1

6,41140E-1

4,81640E-2

4,20909E-1

1,71330E0

6,29580E0

1,13523E0

2,32747E-1

4,15399E-2

2.2

max

3,34279E-2

9,39869E-3

1,05096E0

1,39390E0

1,40002E-2

1,71279E1

3,35386E-2

2,43966E-1

6,41250E-1

4,81642E-2

4,20919E-1

1,71341E0

6,29616E0

1,13524E0

2,32799E-1

4,15423E-2

2.2

mean

3,34277E-2

9,39863E-3

1,05096E0

1,39386E0

1,39998E-2

1,71279E1

3,35382E-2

2,43966E-1

6,41250E-1

4,81641E-2

4,20909E-1

1,71341E0

6,29615E0

1,13524E0

2,32747E-1

4,15423E-2

2.2

relative error(%)

0,00

2.4

BioUML

3,14905E-2

8,53643E-3

1,09079E0

1,37404E0

9,40223E-3

1,72185E1

3,00581E-2

2,33832E-1

6,59029E-1

4,53385E-2

4,15371E-1

1,81410E0

6,12774E0

1,06822E0

2,22637E-1

4,11103E-2

2.4

ByoDyn

3,14905E-2

8,53643E-3

1,09079E0

1,37404E0

9,40223E-3

1,72185E1

3,00581E-2

2,33832E-1

6,59029E-1

4,53385E-2

4,15371E-1

1,81410E0

6,12774E0

1,06822E0

2,22637E-1

4,11103E-2

2.4

MathSBML

3,14905E-2

8,53643E-3

1,09079E0

1,37404E0

9,40223E-3

1,72185E1

3,00581E-2

2,33832E-1

6,59029E-1

4,53385E-2

4,15371E-1

1,81410E0

6,12774E0

1,06822E0

2,22637E-1

4,11103E-2

2.4

SBToolbox2

3,14898E-2

8,53069E-3

1,09072E0

1,37404E0

9,30875E-3

1,72188E1

2,99966E-2

2,33803E-1

6,58919E-1

4,53372E-2

4,15377E-1

1,81400E0

6,12727E0

1,06822E0

2,22682E-1

4,11090E-2

2.4

SBWOdeSolver

3,14906E-2

8,53649E-3

1,09079E0

1,37404E0

9,40254E-3

1,72185E1

3,00584E-2

2,33832E-1

6,59029E-1

4,53386E-2

4,15371E-1

1,81410E0

6,12775E0

1,06822E0

2,22637E-1

4,11102E-2

2.4

VCell

3,14905E-2

8,53643E-3

1,09079E0

1,37404E0

9,40223E-3

1,72185E1

3,00581E-2

2,33832E-1

6,59029E-1

4,53385E-2

4,15371E-1

1,81410E0

6,12774E0

1,06822E0

2,22637E-1

4,11103E-2

2.4

copasi

3,14905E-2

8,53643E-3

1,09079E0

1,37404E0

9,40222E-3

1,72185E1

3,00581E-2

2,33832E-1

6,59029E-1

4,53385E-2

4,15371E-1

1,81410E0

6,12774E0

1,06822E0

2,22637E-1

4,11103E-2

2.4

edu.kgi.roadRunner

3,14905E-2

8,53643E-3

Test: BIOMD0000000089.xml - Ok

Reaction graph

Plots

Comparison with other simulators