Test BIOMD0000000093.xml details

Test: BIOMD0000000093.xml - Ok

test	: BIOMD0000000093.xml
model	: xml, reaction graph
simulator engine	: DormandPrince
generated code	: BIOMD0000000093.java
results	: CSV file
plots	: plot
comparison	: comparison with other simulators
status	: Ok
simulation time	: 0 s.

Parameters:
ZERO 1.0E-11
ATOL 1.0E-15
RTOL 1.0E-12
STEP 0.01

Text color indicates difference between values:
- no significant difference ( < 0.1%)
- small relative error ( > 0.1% and <50%)
- simulation results significantly differ ( >50%)

Variables: JAK IFNRJ2_star_SOCS1 STAT1n_star_PPN PPX IFNRJ2_star_SOCS1_STAT1c IFNRJ2_star_STAT1c_star STAT1c_star_STAT1c_star RJ IFNRJ STAT1n_star STAT1n_star_STAT1n_star STAT1c_star_STAT1c_star_PPX PPN STAT1n_STAT1n_star R IFNRJ2_star IFNRJ2_star_SHP2_SOCS1_STAT1c IFNRJ2_star_STAT1c IFNRJ2 IFNRJ2_star_SHP2 STAT1c IFNR SOCS1 mRNAn SHP2 STAT1n STAT1c_star_PPX IFNRJ2_star_SHP2_STAT1c IFNRJ2_star_SHP2_SOCS1 mRNAc STAT1c_star STAT1n_star_STAT1n_star_PPN STAT1c_STAT1c_star
Simulators: ByoDyn copasi edu.kgi.roadRunner SBToolbox2 VCell Oscill8 Core SBWOdeSolver MathSBML jsim BioUML

time

result

JAK

IFNRJ2_star_SOCS1

STAT1n_star_PPN

PPX

IFNRJ2_star_SOCS1_STAT1c

IFNRJ2_star_STAT1c_star

STAT1c_star_STAT1c_star

IFNRJ

STAT1n_star

STAT1n_star_STAT1n_star

STAT1c_star_STAT1c_star_PPX

PPN

STAT1n_STAT1n_star

IFNRJ2_star

IFNRJ2_star_SHP2_SOCS1_STAT1c

IFNRJ2_star_STAT1c

IFNRJ2

IFNRJ2_star_SHP2

STAT1c

IFNR

SOCS1

mRNAn

SHP2

STAT1n

STAT1c_star_PPX

IFNRJ2_star_SHP2_STAT1c

IFNRJ2_star_SHP2_SOCS1

mRNAc

STAT1c_star

STAT1n_star_STAT1n_star_PPN

STAT1c_STAT1c_star

0.0

BioUML

1,00000E1

0,00000E0

5,00000E1

0,00000E0

6,00000E1

0,00000E0

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

ByoDyn

1,00000E1

0,00000E0

5,00000E1

0,00000E0

6,00000E1

0,00000E0

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

MathSBML

1,00000E1

0,00000E0

5,00000E1

0,00000E0

6,00000E1

0,00000E0

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

Oscill8 Core

0,00000E0

5,00000E1

0,00000E0

6,00000E1

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

SBToolbox2

1,00000E1

0,00000E0

5,00000E1

0,00000E0

6,00000E1

0,00000E0

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

SBWOdeSolver

1,00000E1

0,00000E0

5,00000E1

0,00000E0

6,00000E1

0,00000E0

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

VCell

1,00000E1

0,00000E0

5,00000E1

0,00000E0

6,00000E1

0,00000E0

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

copasi

1,00000E1

0,00000E0

5,00000E1

0,00000E0

-8,30269E-16

0,00000E0

6,00000E1

7,05729E-14

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

edu.kgi.roadRunner

1,00000E1

0,00000E0

5,00000E1

0,00000E0

4,44089E-15

0,00000E0

6,00000E1

2,84217E-14

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

jsim

1,00000E1

0,00000E0

5,00000E1

0,00000E0

6,00000E1

0,00000E0

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

min

1,00000E1

0,00000E0

5,00000E1

0,00000E0

-8,30269E-16

0,00000E0

6,00000E1

0,00000E0

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

max

1,00000E1

0,00000E0

5,00000E1

0,00000E0

4,44089E-15

0,00000E0

6,00000E1

7,05729E-14

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

mean

1,00000E1

0,00000E0

5,00000E1

0,00000E0

6,00000E1

0,00000E0

1,00000E1

0,00000E0

1,00000E3

0,00000E0

1,00000E2

0,00000E0

0.0

relative error(%)

0,00

0.2

BioUML

8,34118E0

3,55986E-60

1,21784E-37

5,00000E1

1,05085E-60

1,78283E-25

1,55164E-27

1,59391E0

6,49000E-2

1,96389E-34

8,98086E-32

8,97663E-31

6,00000E1

3,04042E-39

8,01476E0

1,01166E-9

3,56924E-63

2,38211E-10

7,15870E-6

3,06333E-12

1,00000E3

3,26413E-1

2,50096E-47

2,45635E-38

1,00000E2

1,19617E-41

2,89863E-15

6,25235E-13

1,28059E-62

2,54374E-43

2,50981E-12

5,88282E-35

1,15953E-17

0.2

ByoDyn

8,34118E0

3,55970E-60

1,21783E-37

5,00000E1

1,05079E-60

1,78283E-25

1,55164E-27

1,59391E0

6,49000E-2

1,96388E-34

8,98085E-32

8,97662E-31

6,00000E1

3,04038E-39

8,01476E0

1,01166E-9

3,56900E-63

2,38211E-10

7,15870E-6

3,06333E-12

1,00000E3

3,26413E-1

2,50090E-47

2,45634E-38

1,00000E2

1,19614E-41

2,89863E-15

6,25235E-13

1,28052E-62

2,54371E-43

2,50981E-12

5,88279E-35

1,15953E-17

0.2

MathSBML

8,34118E0

2,70017E-60

1,08611E-37

5,00000E1

8,01129E-61

1,79292E-25

1,57345E-27

1,59391E0

6,49000E-2

1,84358E-34

9,50722E-32

9,50325E-31

6,00000E1

2,71211E-39

8,01476E0

1,01155E-9

2,67456E-63

2,38156E-10

7,15847E-6

3,06263E-12

1,00000E3

3,26413E-1

1,88847E-47

2,30581E-38

1,00000E2

9,03576E-42

2,89965E-15

6,25165E-13

9,82954E-63

2,26769E-43

2,50953E-12

5,52286E-35

1,15993E-17

0.2

Oscill8 Core

1,63067E-41

-9,92037E-13

5,00000E1

1,30346E-41

2,04913E-21

1,59389E0

6,49020E-2

-1,40735E-10

6,62274E-16

5,24789E-24

6,00000E1

8,01478E0

1,27784E-9

9,24525E-44

6,48740E-10

7,16178E-6

1,00000E3

3,26411E-1

3,17209E-29

1,07778E-21

1,00000E2

-1,40892E-10

3,27138E-12

1,47882E-43

7,09299E-26

6,93029E-10

1,64157E-14

0.2

SBToolbox2

8,34118E0

-6,89666E-58

-3,10335E-36

5,00000E1

-3,19545E-58

-1,00559E-25

-3,08650E-27

1,59393E0

6,48916E-2

-2,17058E-33

-4,28119E-31

-4,27655E-30

6,00000E1

-7,73348E-38

8,01475E0

9,92725E-10

-1,84594E-60

2,42968E-10

6,87245E-6

3,12888E-12

1,00000E3

3,26422E-1

-1,49403E-45

-2,71703E-37

1,00000E2

-7,11069E-40

3,25908E-15

6,69740E-13

-3,59222E-60

-6,50439E-42

2,68892E-12

-6,48911E-34

1,30365E-17

0.2

SBWOdeSolver

8,34119E0

3,54937E-60

1,23801E-37

5,00000E1

1,05936E-60

1,79293E-25

1,56449E-27

1,59389E0

6,49020E-2

1,98936E-34

9,07274E-32

9,06846E-31

6,00000E1

3,09074E-39

8,01478E0

1,01230E-9

3,65181E-63

2,38434E-10

7,16176E-6

3,06624E-12

1,00000E3

3,26411E-1

2,55434E-47

2,48822E-38

1,00000E2

1,22167E-41

2,90378E-15

6,26062E-13

1,29000E-62

2,58589E-43

2,51313E-12

5,95910E-35

1,16158E-17

0.2

VCell

8,34118E0

1,92729E-58

1,97866E-36

5,00000E1

6,36435E-59

1,78546E-25

2,53497E-27

1,59390E0

6,49010E-2

1,44169E-33

2,95317E-31

2,95006E-30

6,00000E1

4,93246E-38

8,01477E0

1,01190E-9

2,46827E-61

2,38324E-10

7,15952E-6

3,06483E-12

1,00000E3

3,26412E-1

8,51144E-46

1,80454E-37

1,00000E2

4,05694E-40

2,90252E-15

6,25761E-13

7,54212E-61

4,14453E-42

2,51193E-12

4,31069E-34

1,16108E-17

0.2

copasi

8,34118E0

1,22519E-45

-1,10494E-17

5,00000E1

4,33586E-46

-5,91567E-15

1,55694E-27

1,59391E0

6,49000E-2

-1,03212E-15

1,98079E-19

9,06626E-31

6,00000E1

1,87158E-14

8,01476E0

1,01167E-9

1,81793E-48

2,38211E-10

7,15870E-6

3,06780E-12

1,00000E3

3,26413E-1

4,30261E-33

2,94531E-25

1,00000E2

-1,03379E-15

-9,06626E-31

6,25234E-13

5,05052E-48

1,27120E-29

2,51005E-12

1,10494E-17

1,15971E-17

0.2

edu.kgi.roadRunner

8,34118E0

-1,00132E-46

7,87399E-18

5,00000E1

-3,45388E-47

5,40679E-14

1,52809E-27

1,59391E0

6,49000E-2

2,21817E-15

-6,00306E-20

8,79852E-31

6,00000E1

-5,48525E-14

8,01476E0

1,01165E-9

-1,40140E-49

2,38207E-10

7,15870E-6

3,02695E-12

1,00000E3

3,26413E-1

-3,84374E-34

-4,89999E-26

1,00000E2

2,21943E-15

-8,79852E-31

6,25235E-13

-3,99292E-49

-1,45077E-30

2,49581E-12

-7,87399E-18

1,14625E-17

0.2

jsim

8,34118E0

3,30026E-43

6,02108E-29

5,00000E1

1,75516E-42

2,88841E-19

4,82738E-22

1,35958E0

2,98463E-1

8,02796E-28

6,43884E-25

3,47338E-23

6,00000E1

6,43969E-29

6,83646E0

2,93262E-7

7,06918E-43

7,72036E-7

3,90769E-4

1,00201E-7

1,00000E3

1,50471E0

2,49977E-33

1,72393E-27

1,00000E2

1,07893E-31

8,24336E-11

2,30272E-7

1,30245E-43

2,14656E-30

5,76223E-10

5,16857E-26

1,65275E-9

0.2

min

8,34118E0

-1,00132E-46

-9,92037E-13

5,00000E1

-3,45388E-47

-5,91567E-15

-3,08650E-27

1,35958E0

6,48916E-2

-1,40735E-10

-6,00306E-20

-4,27655E-30

6,00000E1

-5,48525E-14

6,83646E0

9,92725E-10

-1,40140E-49

2,38156E-10

6,87245E-6

3,02695E-12

1,00000E3

3,26411E-1

-3,84374E-34

-4,89999E-26

1,00000E2

-1,40892E-10

-9,06626E-31

6,25165E-13

-3,99292E-49

-1,45077E-30

2,49581E-12

-7,87399E-18

1,14625E-17

0.2

max

8,34119E0

1,63067E-41

7,87399E-18

5,00000E1

1,30346E-41

5,40679E-14

2,04913E-21

1,59393E0

2,98463E-1

2,21817E-15

6,62274E-16

3,47338E-23

6,00000E1

1,87158E-14

8,01478E0

2,93262E-7

7,06918E-43

7,72036E-7

3,90769E-4

1,00201E-7

1,00000E3

1,50471E0

3,17209E-29

1,07778E-21

1,00000E2

2,21943E-15

8,24336E-11

2,30272E-7

1,47882E-43

7,09299E-26

6,93029E-10

1,10494E-17

1,65275E-9

0.2

mean

8,34118E0

3,55970E-60

1,21783E-37

5,00000E1

1,05936E-60

1,78919E-25

1,56449E-27

1,59391E0

6,49000E-2

1,96388E-34

9,50722E-32

9,06846E-31

6,00000E1

3,06556E-39

8,01476E0

1,01167E-9

3,65181E-63

2,38324E-10

7,15870E-6

3,06553E-12

1,00000E3

3,26413E-1

2,55434E-47

2,48822E-38

1,00000E2

1,19614E-41

2,90109E-15

6,25761E-13

1,29000E-62

2,58589E-43

2,51193E-12

5,92094E-35

1,16108E-17

0.2

relative error(%)

0,00

0.4

BioUML

7,16854E0

3,16461E-52

6,60421E-32

5,00000E1

1,97223E-52

2,59503E-21

9,56820E-23

2,61462E0

2,16503E-1

5,17885E-29

1,14652E-26

1,14540E-25

6,00000E1

1,64639E-33

6,61957E0

4,10107E-8

1,38316E-54

1,96321E-8

1,67179E-4

2,60100E-10

1,00000E3

5,48973E-1

2,79510E-41

6,48168E-33

1,00000E2

1,33184E-35

1,03102E-12

1,07285E-10

2,35359E-54

1,38321E-37

4,32299E-10

1,54886E-29

4,12460E-15

0.4

ByoDyn

7,16854E0

3,16460E-52

6,60421E-32

5,00000E1

1,97222E-52

2,59503E-21

9,56820E-23

2,61462E0

2,16503E-1

5,17885E-29

1,14652E-26

1,14540E-25

6,00000E1

1,64639E-33

6,61957E0

4,10107E-8

1,38315E-54

1,96321E-8

1,67179E-4

2,60100E-10

1,00000E3

5,48973E-1

2,79510E-41

6,48168E-33

1,00000E2

1,33184E-35

1,03102E-12

1,07285E-10

2,35358E-54

1,38320E-37

4,32299E-10

1,54886E-29

4,12460E-15

0.4

MathSBML

7,16854E0

3,13430E-52

6,54661E-32

5,00000E1

1,98314E-52

2,59659E-21

9,59487E-23

2,61462E0

2,16503E-1

5,16989E-29

1,16039E-26

1,15928E-25

6,00000E1

1,63211E-33

6,61957E0

4,10103E-8

1,39750E-54

1,96313E-8

1,67179E-4

2,60088E-10

1,00000E3

5,48973E-1

2,72154E-41

6,47041E-33

1,00000E2

1,29696E-35

1,03086E-12

1,07274E-10

2,36666E-54

1,37101E-37

4,32254E-10

1,54621E-29

4,12396E-15

0.4

Oscill8 Core

1,46762E-38

-2,32252E-12

5,00000E1

1,23354E-38

4,53087E-21

2,61461E0

2,16505E-1

-1,02534E-10

1,01091E-15

3,81459E-23

6,00000E1

6,61958E0

4,10326E-8

1,21230E-40

2,00779E-8

1,67209E-4

1,00000E3

5,48970E-1

5,86177E-28

4,77252E-21

1,00000E2

-1,02856E-10

1,18653E-10

1,31926E-40

6,06806E-25

9,37512E-10

4,23058E-14

0.4

SBToolbox2

7,16821E0

-5,08447E-53

1,14810E-31

5,00000E1

-2,00188E-52

2,45128E-21

9,06780E-23

2,61505E0

2,16413E-1

7,02775E-29

1,26755E-26

1,26606E-25

6,00000E1

2,85934E-33

6,61909E0

4,09590E-8

-3,04906E-54

2,02964E-8

1,65185E-4

2,69845E-10

1,00000E3

5,49066E-1

6,50630E-41

8,79882E-33

1,00000E2

3,09140E-35

1,23184E-12

1,17785E-10

-2,13867E-54

2,40883E-37

4,74925E-10

2,09999E-29

4,92797E-15

0.4

SBWOdeSolver

7,16855E0

3,18507E-52

6,63922E-32

5,00000E1

1,99264E-52

2,60075E-21

9,59880E-23

2,61461E0

2,16505E-1

5,20183E-29

1,15085E-26

1,14973E-25

6,00000E1

1,65511E-33

6,61958E0

4,10210E-8

1,40460E-54

1,96397E-8

1,67209E-4

2,60202E-10

1,00000E3

5,48970E-1

2,81314E-41

6,51044E-33

1,00000E2

1,34042E-35

1,03180E-12

1,07344E-10

2,37718E-54

1,39055E-37

4,32539E-10

1,55573E-29

4,12771E-15

0.4

VCell

7,16854E0

3,20595E-52

6,62083E-32

5,00000E1

2,00317E-52

2,59539E-21

9,57029E-23

2,61462E0

2,16504E-1

5,18335E-29

1,14693E-26

1,14581E-25

6,00000E1

1,65051E-33

6,61957E0

4,10116E-8

1,40918E-54

1,96330E-8

1,67182E-4

2,60112E-10

1,00000E3

5,48972E-1

2,81524E-41

6,48733E-33

1,00000E2

1,34133E-35

1,03116E-12

1,07294E-10

2,38786E-54

1,38672E-37

4,32334E-10

1,55020E-29

4,12516E-15

0.4

copasi

7,16854E0

4,47682E-42

-2,40542E-17

5,00000E1

3,51778E-42

7,05729E-15

9,58230E-23

2,61462E0

2,16503E-1

-1,76623E-15

8,94745E-19

1,15058E-25

6,00000E1

-9,17301E-14

6,61957E0

4,10107E-8

3,10569E-44

1,96321E-8

1,67179E-4

2,60093E-10

1,00000E3

5,48973E-1

1,96717E-31

2,81481E-24

1,00000E2

-1,76950E-15

1,02289E-12

1,07285E-10

3,81501E-44

2,59476E-28

4,32299E-10

2,40542E-17

4,12460E-15

0.4

edu.kgi.roadRunner

7,16854E0

-1,48667E-42

2,56187E-17

5,00000E1

-1,10604E-42

7,99361E-14

9,58351E-23

2,61462E0

2,16503E-1

7,84359E-16

-7,61108E-19

1,15028E-25

6,00000E1

-5,20730E-14

6,61957E0

4,10107E-8

-9,25065E-45

1,96321E-8

1,67179E-4

2,60037E-10

1,00000E3

5,48973E-1

-7,33803E-32

-1,80949E-24

1,00000E2

7,87994E-16

1,02318E-12

1,07286E-10

-1,22695E-44

-1,28259E-28

4,32293E-10

-2,56187E-17

4,12422E-15

0.4

jsim

7,16848E0

9,14485E-37

2,26253E-24

5,00000E1

1,16659E-35

6,35891E-16

1,92620E-18

1,90658E0

9,08963E-1

1,35906E-23

5,28954E-21

3,10993E-19

6,00000E1

2,60814E-24

4,82714E0

6,61135E-6

1,08278E-35

2,95487E-5

7,92360E-3

4,87912E-6

1,00000E3

2,34135E0

2,21475E-28

3,16241E-23

1,00000E2

9,13876E-27

8,02172E-9

1,92957E-5

7,65905E-37

8,69380E-26

2,51977E-8

9,47421E-22

1,61303E-7

0.4

min

7,16821E0

-1,48667E-42

-2,32252E-12

5,00000E1

-1,10604E-42

2,45128E-21

9,06780E-23

1,90658E0

2,16413E-1

-1,02534E-10

-7,61108E-19

1,14540E-25

6,00000E1

-9,17301E-14

4,82714E0

4,09590E-8

-9,25065E-45

1,96313E-8

1,65185E-4

2,60037E-10

1,00000E3

5,48970E-1

-7,33803E-32

-1,80949E-24

1,00000E2

-1,02856E-10

1,02289E-12

1,07274E-10

-1,22695E-44

-1,28259E-28

4,32254E-10

-2,56187E-17

4,12396E-15

0.4

max

7,16855E0

9,14485E-37

2,56187E-17

5,00000E1

1,16659E-35

7,99361E-14

1,92620E-18

2,61505E0

9,08963E-1

7,84359E-16

1,01091E-15

3,10993E-19

6,00000E1

2,60814E-24

6,61958E0

6,61135E-6

1,08278E-35

2,95487E-5

7,92360E-3

4,87912E-6

1,00000E3

2,34135E0

5,86177E-28

4,77252E-21

1,00000E2

7,87994E-16

8,02172E-9

1,92957E-5

7,65905E-37

6,06806E-25

2,51977E-8

2,40542E-17

1,61303E-7

0.4

mean

7,16854E0

3,18507E-52

6,62083E-32

5,00000E1

1,99264E-52

2,59867E-21

9,58351E-23

2,61462E0

2,16503E-1

5,18335E-29

1,16039E-26

1,15058E-25

6,00000E1

1,64845E-33

6,61957E0

4,10107E-8

1,40460E-54

1,96330E-8

1,67179E-4

2,60106E-10

1,00000E3

5,48973E-1

2,81524E-41

6,51044E-33

1,00000E2

1,34042E-35

1,03109E-12

1,07294E-10

2,37718E-54

1,39055E-37

4,32334E-10

1,55296E-29

4,12516E-15

0.4

relative error(%)

0,00

0.6

BioUML

6,29873E0

9,88538E-48

1,19833E-28

5,00000E1

9,64233E-48

5,47289E-19

4,74251E-20

3,28517E0

4,14188E-1

6,11712E-26

8,77971E-24

8,76650E-23

6,00000E1

2,98285E-30

5,59065E0

3,11831E-7

1,04159E-49

2,25374E-7

9,55580E-4

3,07883E-9

1,00000E3

7,08077E-1

7,81268E-38

7,66112E-30

1,00000E2

3,70818E-32

2,84071E-11

1,91073E-9

1,13216E-49

2,51695E-34

7,73009E-9

1,82642E-26

1,13650E-13

0.6

ByoDyn

6,29873E0

9,88537E-48

1,19833E-28

5,00000E1

9,64233E-48

5,47289E-19

4,74251E-20

3,28517E0

4,14188E-1

6,11712E-26

8,77971E-24

8,76650E-23

6,00000E1

2,98285E-30

5,59065E0

3,11831E-7

1,04159E-49

2,25374E-7

9,55580E-4

3,07883E-9

1,00000E3

7,08077E-1

7,81268E-38

7,66112E-30

1,00000E2

3,70818E-32

2,84071E-11

1,91073E-9

1,13216E-49

2,51695E-34

7,73009E-9

1,82642E-26

1,13650E-13

0.6

MathSBML

6,29873E0

9,84754E-48

1,19814E-28

5,00000E1

9,65686E-48

5,47240E-19

4,74299E-20

3,28517E0

4,14188E-1

6,12170E-26

8,79396E-24

8,78074E-23

6,00000E1

2,98241E-30

5,59065E0

3,11831E-7

1,04439E-49

2,25373E-7

9,55580E-4

3,07881E-9

1,00000E3

7,08077E-1

7,79011E-38

7,66685E-30

1,00000E2

3,69768E-32

2,84060E-11

1,91069E-9

1,13252E-49

2,51650E-34

7,72995E-9

1,82780E-26

1,13646E-13

0.6

Oscill8 Core

8,28792E-37

-3,32681E-12

5,00000E1

1,07896E-36

6,25766E-20

3,28516E0

4,14190E-1

-8,58163E-11

1,31671E-15

2,01515E-22

6,00000E1

5,59067E0

3,11875E-7

1,50823E-38

2,25766E-7

9,55676E-4

1,00000E3

7,08074E-1

3,10775E-27

1,05068E-20

1,00000E2

-8,62100E-11

1,92982E-9

1,09366E-38

2,10547E-24

8,16383E-9

1,68581E-13

0.6

SBToolbox2

6,29838E0

1,58071E-47

1,67240E-28

5,00000E1

1,60666E-47

5,53779E-19

4,93283E-20

3,28566E0

4,14095E-1

7,57289E-26

9,84538E-24

9,82894E-23

6,00000E1

4,16008E-30

5,59019E0

3,11027E-7

1,82626E-49

2,26997E-7

9,51313E-4

3,10708E-9

1,00000E3

7,08180E-1

1,25913E-37

9,48672E-30

1,00000E2

5,96447E-32

3,03571E-11

1,96849E-9

1,83816E-49

3,51698E-34

7,96733E-9

2,25971E-26

1,21454E-13

0.6

SBWOdeSolver

6,29874E0

1,30878E-47

1,34963E-28

5,00000E1

1,37811E-47

5,49711E-19

4,81844E-20

3,28516E0

4,14190E-1

6,59680E-26

9,14659E-24

9,13234E-23

6,00000E1

3,35863E-30

5,59067E0

3,11875E-7

1,60556E-49

2,25424E-7

9,55677E-4

3,07954E-9

1,00000E3

7,08074E-1

9,30382E-38

8,26259E-30

1,00000E2

4,41253E-32

2,84200E-11

1,91135E-9

1,56747E-49

2,83605E-34

7,73261E-9

1,96923E-26

1,13702E-13

0.6

VCell

6,29873E0

9,88732E-48

1,19846E-28

5,00000E1

9,64445E-48

5,47311E-19

4,74279E-20

3,28517E0

4,14189E-1

6,11766E-26

8,78034E-24

8,76713E-23

6,00000E1

2,98318E-30

5,59065E0

3,11833E-7

1,04185E-49

2,25377E-7

9,55585E-4

3,07888E-9

1,00000E3

7,08076E-1

7,81386E-38

7,66180E-30

1,00000E2

3,70873E-32

2,84081E-11

1,91077E-9

1,13240E-49

2,51723E-34

7,73027E-9

1,82659E-26

1,13655E-13

0.6

copasi

6,29873E0

3,92673E-40

-6,29056E-17

5,00000E1

5,10612E-40

-4,15135E-16

4,75318E-20

3,28517E0

4,14188E-1

-4,12761E-15

2,41883E-18

8,81815E-23

6,00000E1

1,23117E-14

5,59065E0

3,11831E-7

7,02911E-42

2,25374E-7

9,55580E-4

3,07883E-9

1,00000E3

7,08077E-1

1,65862E-30

1,04318E-23

1,00000E2

-4,13610E-15

2,83952E-11

1,91073E-9

5,16287E-42

1,45306E-27

7,73009E-9

6,29056E-17

1,13650E-13

0.6

edu.kgi.roadRunner

6,29873E0

-2,37777E-40

2,29182E-17

5,00000E1

-2,87100E-40

8,70415E-14

4,74762E-20

3,28517E0

4,14188E-1

-5,91726E-16

-1,74974E-18

8,78593E-23

6,00000E1

-3,85886E-14

5,59065E0

3,11831E-7

-3,73148E-42

2,25374E-7

9,55580E-4

3,07876E-9

1,00000E3

7,08077E-1

-1,03045E-30

-8,14611E-24

1,00000E2

-5,89351E-16

2,84075E-11

1,91073E-9

-3,02023E-42

-1,04046E-27

7,73010E-9

-2,29182E-17

1,13651E-13

0.6

jsim

6,29831E0

2,47035E-33

6,03338E-22

5,00000E1

5,18518E-32

3,67605E-14

1,38861E-16

2,05320E0

1,56976E0

2,21965E-21

5,73159E-19

3,69143E-17

6,00000E1

7,52272E-22

3,49486E0

3,37042E-5

8,26271E-32

1,94133E-4

3,88922E-2

3,98634E-5

1,00000E3

2,80345E0

1,02710E-25

5,62275E-21

9,99998E1

4,04968E-24

9,00677E-8

2,05403E-4

3,28644E-33

2,50756E-23

1,73526E-7

1,68307E-19

1,81700E-6

0.6

min

6,29831E0

-2,37777E-40

-3,32681E-12

5,00000E1

-2,87100E-40

-4,15135E-16

4,74251E-20

2,05320E0

4,14095E-1

-8,58163E-11

-1,74974E-18

8,76650E-23

6,00000E1

-3,85886E-14

3,49486E0

3,11027E-7

-3,73148E-42

2,25373E-7

9,51313E-4

3,07876E-9

1,00000E3

7,08074E-1

-1,03045E-30

-8,14611E-24

9,99998E1

-8,62100E-11

2,83952E-11

1,91069E-9

-3,02023E-42

-1,04046E-27

7,72995E-9

-2,29182E-17

1,13646E-13

0.6

max

6,29874E0

2,47035E-33

2,29182E-17

5,00000E1

5,18518E-32

8,70415E-14

1,38861E-16

3,28566E0

1,56976E0

2,21965E-21

1,31671E-15

3,69143E-17

6,00000E1

1,23117E-14

5,59067E0

3,37042E-5

8,26271E-32

1,94133E-4

3,88922E-2

3,98634E-5

1,00000E3

2,80345E0

1,02710E-25

1,05068E-20

1,00000E2

4,04968E-24

9,00677E-8

2,05403E-4

3,28644E-33

2,50756E-23

1,73526E-7

6,29056E-17

1,81700E-6

0.6

mean

6,29873E0

1,30878E-47

1,19846E-28

5,00000E1

1,37811E-47

5,48511E-19

4,75318E-20

3,28517E0

4,14188E-1

6,11766E-26

9,14659E-24

8,81815E-23

6,00000E1

3,17091E-30

5,59065E0

3,11831E-7

1,60556E-49

2,25377E-7

9,55580E-4

3,07885E-9

1,00000E3

7,08077E-1

9,30382E-38

8,26259E-30

1,00000E2

3,70818E-32

2,84078E-11

1,91077E-9

1,56747E-49

2,83605E-34

7,73027E-9

1,89852E-26

1,13655E-13

0.6

relative error(%)

0,00

0.8

BioUML

5,63023E0

1,24167E-44

2,15650E-26

5,00000E1

1,66854E-44

2,10601E-17

3,35401E-18

3,72862E0

6,34941E-1

8,08697E-24

8,49446E-22

8,47696E-21

6,00000E1

5,35948E-28

4,80425E0

1,21941E-6

2,45765E-46

1,17429E-6

3,10198E-3

1,65485E-8

1,00000E3

8,25978E-1

1,92004E-35

1,01352E-27

1,00000E2

9,07661E-30

2,78235E-10

1,36610E-8

1,93669E-46

4,54278E-32

5,54991E-8

2,41040E-24

1,11323E-12

0.8

ByoDyn

5,63023E0

1,24167E-44

2,15650E-26

5,00000E1

1,66854E-44

2,10601E-17

3,35401E-18

3,72862E0

6,34941E-1

8,08697E-24

8,49445E-22

8,47696E-21

6,00000E1

5,35948E-28

4,80425E0

1,21941E-6

2,45765E-46

1,17429E-6

3,10198E-3

1,65485E-8

1,00000E3

8,25978E-1

1,92004E-35

1,01352E-27

1,00000E2

9,07660E-30

2,78235E-10

1,36610E-8

1,93669E-46

4,54278E-32

5,54991E-8

2,41040E-24

1,11323E-12

0.8

MathSBML

5,63023E0

1,24186E-44

2,15690E-26

5,00000E1

1,67282E-44

2,10586E-17

3,35374E-18

3,72862E0

6,34941E-1

8,08903E-24

8,49584E-22

8,47835E-21

6,00000E1

5,36048E-28

4,80425E0

1,21941E-6

2,46732E-46

1,17429E-6

3,10198E-3

1,65484E-8

1,00000E3

8,25978E-1

1,91933E-35

1,01378E-27

1,00000E2

9,07341E-30

2,78232E-10

1,36609E-8

1,94015E-46

4,54358E-32

5,54989E-8

2,41102E-24

1,11322E-12

0.8

Oscill8 Core

1,30441E-35

-4,11714E-12

5,00000E1

2,37045E-35

3,45183E-18

3,72861E0

6,34942E-1

-7,15767E-11

1,82451E-15

9,02699E-21

6,00000E1

4,80427E0

1,21952E-6

4,43876E-37

1,17472E-6

3,10218E-3

1,00000E3

8,25976E-1

9,90047E-27

1,83071E-20

1,00000E2

-7,19779E-11

1,36876E-8

2,31127E-37

4,94752E-24

5,58799E-8

1,18197E-12

0.8

SBToolbox2

5,62987E0

1,72789E-44

2,71123E-26

5,00000E1

2,41803E-44

2,12477E-17

3,43481E-18

3,72915E0

6,34862E-1

9,40119E-24

9,22255E-22

9,20218E-21

6,00000E1

6,73430E-28

4,80378E0

1,21786E-6

3,71465E-46

1,17803E-6

3,09469E-3

1,66217E-8

1,00000E3

8,26088E-1

2,64646E-35

1,17845E-27

1,00000E2

1,24901E-29

2,87681E-10

1,38575E-8

2,73432E-46

5,71735E-32

5,63126E-8

2,80059E-24

1,15102E-12

0.8

SBWOdeSolver

5,63024E0

1,28056E-44

2,18283E-26

5,00000E1

Test: BIOMD0000000093.xml - Ok

Reaction graph

Plots

Comparison with other simulators