Test: BIOMD0000000071.xml - Ok

test: BIOMD0000000071.xml
model: xml, reaction graph
plots: -
comparison: comparison of simulators

Reaction graph

Note: downloaded from http://www.ebi.ac.uk/compneur-srv/biomodels/models-main/publ/BIOMD0000000071.gif

Comparison with other simulators

Legend:

Text color indicates difference between values:
  -  no significant difference ( < 0.1%)
  -  small relative error ( > 0.1% and <50%)
  -  simulation results significantly differ ( >50%)

Variables: Fru16BP  GlcI  Pg  Pc  NADH  GAP  Glc6P  Gly3P  NAD  DHAP  BPGA13  Fru6P  Nb  Pyr 
Simulators: BioUML  ByoDyn  Jarnac  MathSBML  SBToolbox2  SBWOdeSolver  copasi  edu.kgi.roadRunner 
timesimulation Fru16BP GlcI Pg Pc NADH GAP Glc6P Gly3P NAD DHAP BPGA13 Fru6P Nb Pyr
var error var error var error var error var error var error var error var error var error var error var error var error var error var error
0.0 BioUML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48639E-20,003,99329E-20,002,07199E00,000,00000E00,003,95514E00,003,89921E00,003,26745E-20,005,11773E-10,001,59603E00,004,77413E00,00
0.0 ByoDyn1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48639E-20,003,99329E-20,002,07199E00,000,00000E00,003,95514E00,003,89921E00,003,26745E-20,005,11773E-10,001,59603E00,004,77413E00,00
0.0 Jarnac1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48639E-20,003,99329E-20,002,07199E00,000,00000E00,003,95514E00,003,89921E00,003,26745E-20,005,11773E-10,001,59603E00,004,77413E00,00
0.0 MathSBML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48639E-20,003,99329E-20,002,07199E00,000,00000E00,003,95514E00,003,89921E00,003,26745E-20,005,11773E-10,001,59603E00,004,77413E00,00
0.0 SBToolbox21,65370E10,003,40010E-20,007,63940E00,006,51840E00,004,48640E-20,003,99330E-20,002,07200E00,000,00000E00,003,95510E00,003,89920E00,003,26750E-20,005,11770E-10,001,59600E00,004,77410E00,00
0.0 SBWOdeSolver1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48639E-20,003,99329E-20,002,07199E00,000,00000E00,003,95514E00,003,89921E00,003,26745E-20,005,11773E-10,001,59603E00,004,77413E00,00
0.0 copasi1,65371E10,003,40009E-20,007,63936E00,006,51839E00,000,00000E01003,99329E-20,002,07199E00,008,70601E-160,003,95514E00,003,89921E00,003,26745E-20,005,11773E-10,001,59603E00,004,77413E00,00
0.0 edu.kgi.roadRunner1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48639E-20,003,99329E-20,002,07199E00,000,00000E00,003,95514E00,003,89921E00,003,26745E-20,005,11773E-10,001,59603E00,004,77413E00,00
0.2 BioUML1,65371E10,003,40010E-20,007,63934E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,16408E-40,003,95514E00,003,89899E00,003,26745E-20,005,11774E-10,001,59596E00,004,77420E00,00
0.2 ByoDyn1,65371E10,003,40010E-20,007,63934E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,16835E-40,003,95514E00,003,89899E00,003,26745E-20,005,11774E-10,001,59596E00,004,77420E00,00
0.2 Jarnac1,65371E10,003,40010E-20,007,63934E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,16830E-40,003,95514E00,003,89899E00,003,26745E-20,005,11774E-10,001,59596E00,004,77420E00,00
0.2 MathSBML1,65371E10,003,40010E-20,007,63934E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,16838E-40,003,95514E00,003,89899E00,003,26745E-20,005,11774E-10,001,59596E00,004,77420E00,00
0.2 SBToolbox21,65370E10,003,40010E-20,007,63930E00,006,51840E00,004,48640E-20,003,99330E-20,002,07200E00,002,17296E-40,003,95510E00,003,89900E00,003,26740E-20,005,11770E-10,001,59600E00,004,77420E00,00
0.2 SBWOdeSolver1,65371E10,003,40010E-20,007,63934E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,16830E-40,003,95514E00,003,89899E00,003,26745E-20,005,11774E-10,001,59596E00,004,77420E00,00
0.2 copasi1,65408E10,003,40560E-20,167,63081E00,116,51825E00,004,43973E-21,03,99557E-20,002,07248E00,00-1,05283E-41483,91074E01,13,89934E00,003,26334E-20,125,11902E-10,001,59586E00,004,77368E00,00
0.2 edu.kgi.roadRunner1,65371E10,003,40010E-20,007,63934E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,16830E-40,003,95514E00,003,89899E00,003,26745E-20,005,11774E-10,001,59596E00,004,77420E00,00
0.4 BioUML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22179E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77419E00,00
0.4 ByoDyn1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22181E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77419E00,00
0.4 Jarnac1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22186E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77419E00,00
0.4 MathSBML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22190E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77419E00,00
0.4 SBToolbox21,65370E10,003,40010E-20,007,63940E00,006,51840E00,004,48640E-20,003,99330E-20,002,07200E00,002,22250E-40,003,95510E00,003,89900E00,003,26750E-20,005,11770E-10,001,59600E00,004,77420E00,00
0.4 SBWOdeSolver1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22186E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77419E00,00
0.4 copasi1,65408E10,003,40569E-20,167,63069E00,116,51827E00,004,43976E-21,03,99557E-20,002,07250E00,00-2,44153E-51113,91074E01,13,89926E00,003,26331E-20,135,11905E-10,001,59587E00,004,77337E00,00
0.4 edu.kgi.roadRunner1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22186E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77419E00,00
0.6 BioUML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22256E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77417E00,00
0.6 ByoDyn1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22252E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77417E00,00
0.6 Jarnac1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22256E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77417E00,00
0.6 MathSBML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22256E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77417E00,00
0.6 SBToolbox21,65370E10,003,40010E-20,007,63940E00,006,51840E00,004,48640E-20,003,99330E-20,002,07200E00,002,22260E-40,003,95510E00,003,89900E00,003,26750E-20,005,11770E-10,001,59600E00,004,77420E00,00
0.6 SBWOdeSolver1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22256E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77417E00,00
0.6 copasi1,65408E10,003,40568E-20,167,63069E00,116,51827E00,004,43976E-21,03,99557E-20,002,07250E00,00-2,22569E-51103,91074E01,13,89926E00,003,26331E-20,135,11905E-10,001,59587E00,004,77314E00,00
0.6 edu.kgi.roadRunner1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22256E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77417E00,00
0.8 BioUML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22256E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77416E00,00
0.8 ByoDyn1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22247E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77416E00,00
0.8 Jarnac1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77416E00,00
0.8 MathSBML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22255E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77416E00,00
0.8 SBToolbox21,65370E10,003,40010E-20,007,63940E00,006,51840E00,004,48640E-20,003,99330E-20,002,07200E00,002,22250E-40,003,95510E00,003,89900E00,003,26750E-20,005,11770E-10,001,59600E00,004,77420E00,00
0.8 SBWOdeSolver1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77416E00,00
0.8 copasi1,65408E10,003,40568E-20,167,63070E00,116,51827E00,004,43976E-21,03,99557E-20,002,07250E00,00-2,21621E-51103,91074E01,13,89926E00,003,26331E-20,135,11905E-10,001,59587E00,004,77298E00,00
0.8 edu.kgi.roadRunner1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77416E00,00
1.0 BioUML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22255E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.0 ByoDyn1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22255E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.0 Jarnac1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.0 MathSBML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22255E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.0 SBToolbox21,65370E10,003,40010E-20,007,63940E00,006,51840E00,004,48640E-20,003,99330E-20,002,07200E00,002,22250E-40,003,95510E00,003,89900E00,003,26750E-20,005,11770E-10,001,59600E00,004,77420E00,00
1.0 SBWOdeSolver1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.0 copasi1,65408E10,003,40568E-20,167,63070E00,116,51827E00,004,43976E-21,03,99557E-20,002,07250E00,00-2,21156E-51103,91074E01,13,89926E00,003,26331E-20,135,11905E-10,001,59587E00,004,77286E00,00
1.0 edu.kgi.roadRunner1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.2 BioUML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22257E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.2 ByoDyn1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22251E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.2 Jarnac1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.2 MathSBML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.2 SBToolbox21,65370E10,003,40010E-20,007,63940E00,006,51840E00,004,48640E-20,003,99330E-20,002,07200E00,002,22250E-40,003,95510E00,003,89900E00,003,26750E-20,005,11770E-10,001,59600E00,004,77410E00,00
1.2 SBWOdeSolver1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.2 copasi1,65408E10,003,40568E-20,167,63070E00,116,51827E00,004,43976E-21,03,99557E-20,002,07250E00,00-2,21034E-51103,91074E01,13,89926E00,003,26331E-20,135,11905E-10,001,59587E00,004,77277E00,00
1.2 edu.kgi.roadRunner1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.4 BioUML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22265E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77415E00,00
1.4 ByoDyn1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22255E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.4 Jarnac1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.4 MathSBML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.4 SBToolbox21,65370E10,003,40010E-20,007,63940E00,006,51840E00,004,48640E-20,003,99330E-20,002,07200E00,002,22250E-40,003,95510E00,003,89900E00,003,26750E-20,005,11770E-10,001,59600E00,004,77410E00,00
1.4 SBWOdeSolver1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.4 copasi1,65408E10,003,40568E-20,167,63070E00,116,51827E00,004,43976E-21,03,99557E-20,002,07250E00,00-2,21077E-51103,91074E01,13,89926E00,003,26331E-20,135,11905E-10,001,59587E00,004,77271E00,00
1.4 edu.kgi.roadRunner1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.6 BioUML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22274E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.6 ByoDyn1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.6 Jarnac1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.6 MathSBML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22255E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.6 SBToolbox21,65370E10,003,40010E-20,007,63940E00,006,51840E00,004,48640E-20,003,99330E-20,002,07200E00,002,22250E-40,003,95510E00,003,89900E00,003,26750E-20,005,11770E-10,001,59600E00,004,77410E00,00
1.6 SBWOdeSolver1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.6 copasi1,65408E10,003,40568E-20,167,63070E00,116,51827E00,004,43976E-21,03,99557E-20,002,07250E00,00-2,21157E-51103,91074E01,13,89926E00,003,26331E-20,135,11905E-10,001,59587E00,004,77267E00,00
1.6 edu.kgi.roadRunner1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.8 BioUML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22282E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.8 ByoDyn1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22253E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.8 Jarnac1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.8 MathSBML1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E00,004,77414E00,00
1.8 SBToolbox21,65370E10,003,40010E-20,007,63940E00,006,51840E00,004,48640E-20,003,99330E-20,002,07200E00,002,22260E-40,003,95510E00,003,89900E00,003,26750E-20,005,11770E-10,001,59600E00,004,77410E00,00
1.8 SBWOdeSolver1,65371E10,003,40009E-20,007,63936E00,006,51839E00,004,48640E-20,003,99329E-20,002,07199E00,002,22254E-40,003,95514E00,003,89899E00,003,26745E-20,005,11773E-10,001,59595E0